RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Cyp3a11Q64459 504 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Arhgap20Q6IFT4 1182 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Nacc1Q7TSZ8 514 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 FsbpQ8BKE5 299 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ccdc184Q8BMK5 191 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Hip1Q8VD75 1029 aaKnown RBP13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ccdc92Q8VDN4 314 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Vps11Q91W86 941 aaKnown RBP13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Vangl2Q91ZD4 521 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Serbp1Q9CY58 407 aaKnown RBP13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Batf3Q9D275 118 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tspan3Q9QY33 253 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gipc2Q9Z2H7 314 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Phrf1A6H619 1682 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 2010300C02RikE9Q3M9 1175 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 IqcmQ149I8 489 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Lrrn4clQ3TYX2 239 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tgoln2Q62314 363 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 NfascQ810U3 1240 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Acsf2Q8VCW8 615 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Nt5c1bQ91YE9 573 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Dok4Q99KE3 325 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Fuca2Q99KR8 461 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ern2Q9Z2E3 911 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gm8113E0CXS8 587 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Clca3bE9PUL3 1044 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 1700011I03RikE9PYL8 271 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 MafgO54790 162 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 ZfrO88532 1074 aaKnown RBP13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 TxnP10639 105 aaKnown RBP13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tgm2P21981 686 aaKnown RBP13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Mov10P23249 1004 aaKnown RBP13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Fam120bQ6RI63 786 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tbx10Q810F8 385 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Slc6a15Q8BG16 729 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ticam2Q8BJQ4 232 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tmtc3Q8BRH0 920 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Havcr2Q8VIM0 281 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Snx15Q91WE1 337 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Cog2Q921L5 731 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Zfp64Q99KE8 643 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tdrd1Q99MV1 1172 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 CabyrQ9D424 453 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ripk3Q9QZL0 486 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tle2Q9WVB2 767 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Cldn3Q9Z0G9 219 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 L3mbtl1A2A5N8 826 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gm5483B2RV77 97 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gm3739L7N296 216 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Slc2a4P14142 509 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 M6prP24668 278 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Kcna2P63141 499 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Siah1bQ06985 282 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Pan2Q8BGF7 1200 aaKnown RBP13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 B3glctQ8BHT6 489 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Pgm5Q8BZF8 567 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Stx5Q8K1E0 355 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Zdhhc3Q8R173 299 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Pip4k2cQ91XU3 421 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 MajinQ9D992 256 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Cables1Q9ESJ1 568 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Kcnq2Q9Z351 759 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Kiaa1522A2A7S8 1013 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Olfr67F8VPJ8 320 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gm3383J3QQ59 259 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gm3164L7N2B9 238 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gm3239L7N2D9 227 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 PtgisO35074 501 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ttc9Q3V038 219 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Zbtb8osQ505B7 168 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Papss1Q60967 624 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Dlgap2Q8BJ42 1059 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Slc38a7Q8BWH0 463 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Nipal4Q8BZF2 406 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Prpf39Q8K2Z2 665 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Rmnd5bQ91YQ7 393 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 PompQ9CQT5 141 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Commd8Q9CZG3 183 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Lrrc46Q9DAP0 323 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Magel2Q9QZ04 1284 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Mta2Q9R190 668 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 TfebQ9R210 475 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Golga4Q91VW5 2238 aa13.04□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Lamb1P02469 1786 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 PpargP37238 505 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ccr1P51675 355 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 YwhazP63101 245 aaKnown RBP13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tex24Q5DP50 351 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Stk40Q7TNL3 435 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Btnl1Q7TST0 509 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 1700001J03RikQ80ZR8 219 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Exoc3l1Q8BI71 739 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tmprss4Q8VCA5 435 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Arpc2Q9CVB6 300 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tjap1Q9DCD5 539 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Hes6Q9JHE6 224 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Zc3h12bG3X9I7 835 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 PrkcdP28867 674 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ythdf1P59326 559 aaKnown RBP13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ptchd3Q0EEE2 906 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 131.8 ms