RNA–Protein interactions for RNA: ENST00000641336.1

SAMMSON-213, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,521 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-213ENST00000641336 HOXB8P17481 243 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 RRM2P31350 389 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PCYT1AP49585 367 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 MFAP3P55082 362 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 MRPS25P82663 173 aaKnown RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ARHGAP8P85298 464 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PLOD1Q02809 727 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ZNF252P-AS1Q0IIN9 211 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ZNF177Q13360 481 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 KCNC3Q14003 757 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 KCNAB1Q14722 419 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 MORF4L2Q15014 288 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 KRT31Q15323 416 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PARP6Q2NL67 630 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 FNDC3BQ53EP0 1204 aaKnown RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 SGO2Q562F6 1265 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 COL13A1Q5TAT6 717 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 DAB2IPQ5VWQ8 1189 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 CES4AQ5XG92 561 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 DEGS2Q6QHC5 323 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 BLOC1S2Q6QNY1 142 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 TMC5Q6UXY8 1006 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 KRT25Q7Z3Z0 450 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 TAF8Q7Z7C8 310 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 EXOC3L1Q86VI1 746 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 LONP2Q86WA8 852 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 GAS2L3Q86XJ1 694 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 CLVS1Q8IUQ0 354 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 GALNT11Q8NCW6 608 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ZNF417Q8TAU3 575 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 SPATA20Q8TB22 786 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ZNF384Q8TF68 577 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ZUFSPQ96AP4 578 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 TRIM43Q96BQ3 446 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 HSPBAP1Q96EW2 488 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 EDC3Q96F86 508 aaKnown RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 HES6Q96HZ4 224 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 FUBP3Q96I24 572 aaKnown RBP eCLIP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 EAF1Q96JC9 268 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 CEP170P1Q96L14 293 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 NSMCE3Q96MG7 304 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 NOX5Q96PH1 765 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ZNF587Q96SQ5 575 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 RAD9AQ99638 391 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 CCM2Q9BSQ5 444 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 UBXN6Q9BZV1 441 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 CEP44Q9C0F1 390 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 GOLPH3LQ9H4A5 285 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ATP13A3Q9H7F0 1226 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 TRIM45Q9H8W5 580 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 CERS4Q9HA82 394 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PFDN4Q9NQP4 134 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PKD2L2Q9NZM6 624 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 USP36Q9P275 1121 aaKnown RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 TSPYL4Q9UJ04 414 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PCOLCE2Q9UKZ9 415 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 NAALADL1Q9UQQ1 740 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 NAALAD2Q9Y3Q0 740 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PCDHGA9Q9Y5G4 932 aaKnown RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 MED14O60244 1454 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 CD163L1Q9NR16 1453 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 DLG5Q8TDM6 1919 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 FRMPD4Q14CM0 1322 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ZMYM3Q14202 1370 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 BTN3A1O00481 513 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 CXCL11O14625 94 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PCDH17O14917 1159 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PLD2O14939 933 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ATP2A1O14983 1001 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 TO15178 435 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 KCNN4O15554 427 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 MYO1DO94832 1006 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 FARP2O94887 1054 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 SNAPINO95295 136 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 GJB6O95452 261 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 OTCP00480 354 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 GSTA2P09210 222 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PRR35P0CG20 571 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PDCP20941 246 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 FUT4P22083 530 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ADSLP30566 484 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PCGF2P35227 344 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 ADRA1BP35368 520 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 SLC26A3P40879 764 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 IL15P40933 162 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 NT5C2P49902 561 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 MTHFSP49914 203 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 PRRX1P54821 245 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 BPIFB4P59827 614 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 RPP30P78346 268 aaKnown RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 GTF2IP78347 998 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 LPIN1Q14693 890 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 NAA30Q147X3 362 aaPredicted RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 CHRNA6Q15825 494 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 SMU1Q2TAY7 513 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 THEM4Q5T1C6 240 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 TAF2Q6P1X5 1199 aa5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 CWC27Q6UX04 472 aaKnown RBP5.38□□□□□ -1.55
SAMMSON-213ENST00000641336 B3GNT9Q6UX72 402 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms