RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 XPO6Q96QU8 1125 aaKnown RBP12.11□□□□□ -0.47
MECP2-226ENST00000640414 NUP58Q9BVL2 599 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 BBS2Q9BXC9 721 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 TRIM5Q9C035 493 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 XPO4Q9C0E2 1151 aaKnown RBP12.11□□□□□ -0.47
MECP2-226ENST00000640414 C6orf106Q9H6K1 298 aaPredicted RBP12.11□□□□□ -0.47
MECP2-226ENST00000640414 CPNE5Q9HCH3 593 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 TM9SF3Q9HD45 589 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 TMEM30AQ9NV96 361 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 CDH9Q9ULB4 789 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 KNL1Q8NG31 2342 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 A0A1B0GTH6 734 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
MECP2-226ENST00000640414 TEX33O43247 280 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 PAPSS1O43252 624 aaPredicted RBP12.1□□□□□ -0.47
MECP2-226ENST00000640414 ADCY5O95622 1261 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 LDHAP00338 332 aaKnown RBP12.1□□□□□ -0.47
MECP2-226ENST00000640414 C1SP09871 688 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 CISD3P0C7P0 127 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 IRF1P10914 325 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 CDK4P11802 303 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 KRT10P13645 584 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 PRKCSHP14314 528 aaPredicted RBP12.1□□□□□ -0.47
MECP2-226ENST00000640414 CTSKP43235 329 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 DGKGP49619 791 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 CSRP3P50461 194 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 ZNF75DP51815 510 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 CYP24A1Q07973 514 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 MAPRE1Q15691 268 aaKnown RBP12.1□□□□□ -0.47
MECP2-226ENST00000640414 INAVAQ3KP66 663 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 TBC1D25Q3MII6 688 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 VWA3BQ502W6 1294 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 MIIPQ5JXC2 388 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 C1orf220Q5T0J3 134 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 HECTD3Q5T447 861 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 ARHGAP40Q5TG30 622 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 FBXL19Q6PCT2 694 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 LIMS2Q7Z4I7 341 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 FAM124AQ86V42 546 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 GATAD2AQ86YP4 633 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 MYCBPAPQ8TBZ2 947 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 TTC9Q92623 222 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 PRCCQ92733 491 aaPredicted RBP12.1□□□□□ -0.47
MECP2-226ENST00000640414 CCDC127Q96BQ5 260 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 SIPA1Q96FS4 1042 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 CNDP2Q96KP4 475 aaKnown RBP12.1□□□□□ -0.47
MECP2-226ENST00000640414 LGMNQ99538 433 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 CCSER2Q9H7U1 834 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 OSGEPQ9NPF4 335 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 RTN4Q9NQC3 1192 aaKnown RBP12.1□□□□□ -0.47
MECP2-226ENST00000640414 INTS13Q9NVM9 706 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 MARK1Q9P0L2 795 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.1□□□□□ -0.47
MECP2-226ENST00000640414 UNC79Q9P2D8 2635 aa12.1□□□□□ -0.47
MECP2-226ENST00000640414 GREM1O60565 184 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 KRT19P08727 400 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 PDGFRBP09619 1106 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 KRT13P13646 458 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 YWHAQP27348 245 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 ACADVLP49748 655 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 VAMP7P51809 220 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 COPAP53621 1224 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 TMPRSS3P57727 454 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 DLG4P78352 724 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 MAN2A1Q16706 1144 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 COLEC12Q5KU26 742 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 TPGS1Q6ZTW0 290 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 INTS8Q75QN2 995 aaKnown RBP12.09□□□□□ -0.47
MECP2-226ENST00000640414 PARD3BQ8TEW8 1205 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 SLC35C1Q96A29 364 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 NAF1Q96HR8 494 aaKnown RBP12.09□□□□□ -0.47
MECP2-226ENST00000640414 PCED1AQ9H1Q7 454 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 NDST4Q9H3R1 872 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 WDR35Q9P2L0 1181 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 CHORDC1Q9UHD1 332 aaPredicted RBP12.09□□□□□ -0.47
MECP2-226ENST00000640414 SIX4Q9UIU6 781 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 ITGA11Q9UKX5 1188 aa12.09□□□□□ -0.47
MECP2-226ENST00000640414 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.09□□□□□ -0.47
MECP2-226ENST00000640414 A0A1B0GTQ1 180 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 LGALS16A8MUM7 142 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 LDOC1O95751 146 aaPredicted RBP12.08□□□□□ -0.48
MECP2-226ENST00000640414 TRIM49P0CI25 452 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 TRIM49CP0CI26 452 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 ACADMP11310 421 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 ACO1P21399 889 aaKnown RBP12.08□□□□□ -0.48
MECP2-226ENST00000640414 ACSL1P33121 698 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 ZNF132P52740 706 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 RBP5P82980 135 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 ENPP2Q13822 863 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 PSMD6Q15008 389 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 FILIP1LQ4L180 1135 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 MDH1BQ5I0G3 518 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 PRAMEF14Q5SWL7 426 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 DPH6Q7L8W6 267 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 BRSK2Q8IWQ3 736 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 NUP93Q8N1F7 819 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 ZNF248Q8NDW4 579 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 PDZD8Q8NEN9 1154 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 TMC2Q8TDI7 906 aa12.08□□□□□ -0.48
MECP2-226ENST00000640414 CACTINQ8WUQ7 758 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms