RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 TUBGCP2Q9BSJ2 902 aa19.7■□□□□ 0.74
CLN6-213ENST00000636212 NDST4Q9H3R1 872 aa19.7■□□□□ 0.74
CLN6-213ENST00000636212 CD248Q9HCU0 757 aa19.7■□□□□ 0.74
CLN6-213ENST00000636212 ABCB8Q9NUT2 735 aa19.7■□□□□ 0.74
CLN6-213ENST00000636212 SLC12A6Q9UHW9 1150 aa19.7■□□□□ 0.74
CLN6-213ENST00000636212 DNAJC12Q9UKB3 198 aa19.7■□□□□ 0.74
CLN6-213ENST00000636212 PLXND1Q9Y4D7 1925 aa19.7■□□□□ 0.74
CLN6-213ENST00000636212 MYO18AQ92614 2054 aaKnown RBP19.69■□□□□ 0.74
CLN6-213ENST00000636212 LNP1A1A4G5 178 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 C4orf47A7E2U8 309 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 PABPC1P11940 636 aaKnown RBP19.69■□□□□ 0.74
CLN6-213ENST00000636212 POLR2EP19388 210 aaKnown RBP19.69■□□□□ 0.74
CLN6-213ENST00000636212 HLA-FP30511 346 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 BPIFB4P59827 614 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 ZNF33AQ06730 810 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 PDCLQ13371 301 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 DUOXA1Q1HG43 343 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 EFHC1Q5JVL4 640 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 METTL3Q86U44 580 aaKnown RBP19.69■□□□□ 0.74
CLN6-213ENST00000636212 MFN1Q8IWA4 741 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 DEFB119Q8N690 84 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 SIPA1Q96FS4 1042 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 GBP4Q96PP9 640 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 PDCL3Q9H2J4 239 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 STIM2Q9P246 746 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 PCDHGC3Q9UN70 934 aa19.69■□□□□ 0.74
CLN6-213ENST00000636212 NUP205Q92621 2012 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 GOLGA6L7A0A1B0GV03 622 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 BECN2A8MW95 431 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 PATE3B3GLJ2 98 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 PAPSS1O43252 624 aaPredicted RBP19.68■□□□□ 0.74
CLN6-213ENST00000636212 MOCS2O96007 188 aaPredicted RBP19.68■□□□□ 0.74
CLN6-213ENST00000636212 CFIP05156 583 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 FYNP06241 537 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 TPM2P07951 284 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 ITPKAP23677 461 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 CD6P30203 668 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 OXTRP30559 389 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 ATXN3P54252 364 aaPredicted RBP19.68■□□□□ 0.74
CLN6-213ENST00000636212 IRX4P78413 519 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 TAC4Q86UU9 113 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 TMPRSS6Q8IU80 811 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 RGL4Q8IZJ4 473 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.68■□□□□ 0.74
CLN6-213ENST00000636212 ATP6V0D2Q8N8Y2 350 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 ADAM32Q8TC27 787 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 SORCS1Q8WY21 1168 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 PPP1R13BQ96KQ4 1090 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 FCRL2Q96LA5 508 aaPredicted RBP19.68■□□□□ 0.74
CLN6-213ENST00000636212 LSM14BQ9BX40 385 aaKnown RBP19.68■□□□□ 0.74
CLN6-213ENST00000636212 SLC6A17Q9H1V8 727 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 SYNCQ9H7C4 482 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 ACP6Q9NPH0 428 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 TJP2Q9UDY2 1190 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 PILRBQ9UKJ0 227 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 ATXN2Q99700 1313 aaKnown RBP19.68■□□□□ 0.74
CLN6-213ENST00000636212 SDK1Q7Z5N4 2213 aa19.68■□□□□ 0.74
CLN6-213ENST00000636212 ABCA7Q8IZY2 2146 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 KCNJ18B7U540 433 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 GOLGA6L22H0YM25 854 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 GLI1P08151 1106 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 ADRB1P08588 477 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 SLC2A3P11169 496 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 SLC6A4P31645 630 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 ST8SIA6P61647 398 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 CDK17Q00537 523 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 APBA1Q02410 837 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 GFPT1Q06210 699 aaPredicted RBP19.67■□□□□ 0.74
CLN6-213ENST00000636212 KCNJ12Q14500 433 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 HSP90AA4PQ58FG1 418 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 FAM133BQ5BKY9 247 aaKnown RBP19.67■□□□□ 0.74
CLN6-213ENST00000636212 WDR45BQ5MNZ6 344 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 SYPL2Q5VXT5 272 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 MBLAC2Q68D91 279 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 SLC23A3Q6PIS1 610 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 CLEC17AQ6ZS10 378 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 PASD1Q8IV76 773 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 RNF34Q969K3 372 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 HSPA12BQ96MM6 686 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 LHX5Q9H2C1 402 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 FAM204AQ9H8W3 233 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 FBRSQ9HAH7 460 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 ITM2CQ9NQX7 267 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 SUSD2Q9UGT4 822 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 CYTH4Q9UIA0 394 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 SLC6A14Q9UN76 642 aa19.67■□□□□ 0.74
CLN6-213ENST00000636212 MOCS3O95396 460 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 TRUB2O95900 331 aaKnown RBP19.66■□□□□ 0.74
CLN6-213ENST00000636212 DLDP09622 509 aaKnown RBP19.66■□□□□ 0.74
CLN6-213ENST00000636212 GNSP15586 552 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 PRKCHP24723 683 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 SGSHP51688 502 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 CDH18Q13634 790 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 RAPGEF1Q13905 1077 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 DCAF6Q58WW2 860 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 TMEM215Q68D42 235 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 OR6B2Q6IFH4 312 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 KIAA0907Q7Z7F0 614 aaPredicted RBP19.66■□□□□ 0.74
CLN6-213ENST00000636212 CARNMT1Q8N4J0 409 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 OR2T3Q8NH03 318 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms