RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ZDHHC24Q6UX98 284 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 RANBP10Q6VN20 620 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 RFX8Q6ZV50 586 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 UNC13DQ70J99 1090 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 RNF44Q7L0R7 432 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 KCTD20Q7Z5Y7 419 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 SRGAP1Q7Z6B7 1085 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 TXLNBQ8N3L3 684 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 FSTL5Q8N475 847 aaPredicted RBP1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 C11orf44Q8N8P7 122 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 NGDNQ8NEJ9 315 aaKnown RBP1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 MAFAQ8NHW3 353 aaPredicted RBP1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 DNAJB14Q8TBM8 379 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 BPIFB1Q8TDL5 484 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 KBTBD7Q8WVZ9 684 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 IGFBPL1Q8WX77 278 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 MIB2Q96AX9 1013 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 RUNDC1Q96C34 613 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 APIPQ96GX9 242 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 ZBTB45Q96K62 511 aaPredicted RBP1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 TNIP3Q96KP6 325 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 MRGPRX1Q96LB2 322 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 TBCBQ99426 244 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 NTPCRQ9BSD7 190 aaKnown RBP1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 TRIM54Q9BYV2 358 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 ARHGAP39Q9C0H5 1083 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 NUP62CLQ9H1M0 184 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 TMEM60Q9H2L4 133 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 CXorf36Q9H7Y0 433 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 ATP6V0A4Q9HBG4 840 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 TMEM45AQ9NWC5 275 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 ZNF212Q9UDV6 495 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 MID2Q9UJV3 735 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 VPS4AQ9UN37 437 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 L1RE1Q9UN81 338 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 COG5Q9UP83 839 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 PIK3C2AO00443 1686 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 RGPD1P0DJD0 1748 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 DOT1LQ8TEK3 1739 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 SHANK3Q9BYB0 1731 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 POGZQ7Z3K3 1410 aa1.31□□□□□ -2.2
SMARCB1-209ENST00000635578 MAP3K1Q13233 1512 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 GPATCH8Q9UKJ3 1502 aaKnown RBP1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 KAT6BQ8WYB5 2073 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 IQGAP3Q86VI3 1631 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 MYOM1P52179 1685 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 TOPAZ1Q8N9V7 1692 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 PEAK1Q9H792 1746 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 LOC102723971A0A1B0GUV8 181 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 MBD3L4A6NDZ8 208 aaPredicted RBP1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 MBD3L3A6NE82 208 aaPredicted RBP1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 POM121BA6NF01 834 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 AQP7P3A6NL99 342 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 ERI2A8K979 691 aaKnown RBP1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 ISM1B1AKI9 464 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 EXOC5O00471 708 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 APOL1O14791 398 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 KIF3BO15066 747 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 PMM2O15305 246 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 THAP12O43422 761 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 PRC1O43663 620 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 PLIN1O60240 522 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 CCNT2O60583 730 aaKnown RBP1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 DDNO94850 711 aaPredicted RBP1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 INMTO95050 263 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 ZBED1O96006 694 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 MYL1P05976 194 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 CSF1RP07333 972 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 FGF2P09038 288 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 ACAA1P09110 424 aaPredicted RBP1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 MYL4P12829 197 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 HGFP14210 728 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 HOXB2P14652 356 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 PHKG2P15735 406 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 CREB1P16220 341 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 EN2P19622 333 aaPredicted RBP1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 TCEA1P23193 301 aaKnown RBP1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 KLRC1P26715 233 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 STT3AP46977 705 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 CXCR3P49682 368 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 COMPP49747 757 aaPredicted RBP1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 CPT1AP50416 773 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 NEK3P51956 506 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 PGDP52209 483 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 DGKEP52429 567 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 PGGT1BP53609 377 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 P2RX3P56373 397 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 WNT3P56703 355 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 LTBQ06643 244 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 LMAN2Q12907 356 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 SLC14A1Q13336 389 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 PICALMQ13492 652 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 BFSP2Q13515 415 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 CCNIQ14094 377 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 GBX1Q14549 363 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 KCNAB1Q14722 419 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 PTGR1Q14914 329 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 LONRF1Q17RB8 773 aa1.3□□□□□ -2.2
SMARCB1-209ENST00000635578 IZUMO4Q1ZYL8 232 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms