RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ANAPC4Q9UJX5 808 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 GTF2A1LQ9UNN4 478 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 RUVBL1Q9Y265 456 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 PCDHGB2Q9Y5G2 931 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 WNT6Q9Y6F9 365 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF609O15014 1411 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 SCN9AQ15858 1988 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF541Q9H0D2 1346 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 PDE4DIPQ5VU43 2346 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 GOLGA6L3A6NEY3 463 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 CLCA1A8K7I4 914 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 HMGB1P1B2RPK0 211 aaPredicted RBP2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 VWC2LB2RUY7 222 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 PPEF2O14830 753 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 HNRNPDLO14979 420 aaKnown RBP2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 AREL1O15033 823 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 THAP12O43422 761 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 WDHD1O75717 1129 aaPredicted RBP2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 MT-ND5P03915 603 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 CSTBP04080 98 aaKnown RBP2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 ANXA1P04083 346 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 SERPINB2P05120 415 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 SNRPA1P09661 255 aaKnown RBP2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 RAP2AP10114 183 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 RARBP10826 455 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 ALAS1P13196 640 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 ATP5JP18859 108 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 EEF1GP26641 437 aaKnown RBP2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 EPHB2P29323 1055 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 NR4A2P43354 598 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 KCNJ5P48544 419 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 ALDH9A1P49189 494 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 NOMO3P69849 1222 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 CTBP1Q13363 440 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 RAB32Q13637 225 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 STARD3Q14849 445 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 CCDC38Q502W7 563 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 ALFQ53S48 1182 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 LMBRD2Q68DH5 695 aaPredicted RBP2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC9A4Q6AI14 798 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 CATSPERGQ6ZRH7 1159 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF365Q70YC5 407 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 MEPCEQ7L2J0 689 aaKnown RBP2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 C2CD5Q86YS7 1000 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 RASAL3Q86YV0 1011 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 TXLNBQ8N3L3 684 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 SDR16C5Q8N3Y7 309 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 MYCT1Q8N699 235 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 ZBTB8BQ8NAP8 495 aaPredicted RBP2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 FANCBQ8NB91 859 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 SMRP1Q8NCR6 262 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 CYP2W1Q8TAV3 490 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 LPIN2Q92539 896 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF566Q969W8 418 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 IQCDQ96DY2 449 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 MYOCQ99972 504 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 MRI1Q9BV20 369 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 PACSIN1Q9BY11 444 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 STK33Q9BYT3 514 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 GPR35Q9HC97 309 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 A1CFQ9NQ94 594 aaKnown RBP2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 MAGED2Q9UNF1 606 aaPredicted RBP2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 PLEKHM1Q9Y4G2 1056 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 CEP83Q9Y592 693 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 PCDHGB3Q9Y5G1 929 aa2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 RBBP6Q7Z6E9 1792 aaKnown RBP2.89□□□□□ -1.95
SMARCB1-208ENST00000634926 A0A087WWL8 130 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 TCRBV7S2A1N4TA0A589 114 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 MBD3L4A6NDZ8 208 aaPredicted RBP2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 MBD3L3A6NE82 208 aaPredicted RBP2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 PYCARD-AS1I3L0S3 204 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 KCNQ3O43525 872 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 SKAP2O75563 359 aaPredicted RBP2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 HAUS5O94927 633 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 GNAI2P04899 355 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 GJB1P08034 283 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 HMOX1P09601 288 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 SNHG28P0DPA3 235 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 CD53P19397 219 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 KLRC1P26715 233 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 PDIA3P30101 505 aaKnown RBP2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC6A4P31645 630 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 PHKA1P46020 1223 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 POU6F2P78424 691 aaPredicted RBP2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 FOXO1Q12778 655 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC10A2Q12908 348 aaPredicted RBP2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 UBXN2BQ14CS0 331 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 ZACNQ401N2 412 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 CEP78Q5JTW2 689 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 CCDC70Q6NSX1 233 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF529Q6P280 563 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 CLEC4GQ6UXB4 293 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 UNC13DQ70J99 1090 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 RNF44Q7L0R7 432 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 CACNA2D3Q8IZS8 1091 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 AOPEPQ8N6M6 819 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 PAF1Q8N7H5 531 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 CNBD1Q8NA66 436 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 SCAMP4Q969E2 229 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms