RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	SEMA3B	Q13214	749 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	BECN1	Q14457	450 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	ZNF234	Q14588	700 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	CCDC40	Q4G0X9	1142 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	FNDC3B	Q53EP0	1204 aa	Known RBP	10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	MPPE1	Q53F39	396 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	ANKRD40	Q6AI12	368 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	PM20D1	Q6GTS8	502 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	UBA3	Q8TBC4	463 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	NDRG1	Q92597	394 aa	Known RBP	10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	EDEM1	Q92611	657 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	SIPA1	Q96FS4	1042 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	NT5C1B	Q96P26	610 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	GPR174	Q9BXC1	333 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	SLC2A11	Q9BYW1	496 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	MIR1-1HG	Q9H1L0	117 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	CAPN10	Q9HC96	672 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	METTL14	Q9HCE5	456 aa	Known RBP	10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	CD248	Q9HCU0	757 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	ELOVL2	Q9NXB9	296 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	THAP10	Q9P2Z0	257 aa	Predicted RBP	10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	FBXO10	Q9UK96	956 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	KIAA1257	Q9ULG3	409 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	COQ4	Q9Y3A0	265 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	PCDH15	Q96QU1	1955 aa		10.82	□□□□□ -0.68
UBE3A-223	ENST00000631247	LAMA5	O15230	3695 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	TRIM49B	A6NDI0	452 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	UPK3BL1	B0FP48	263 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	C1QTNF9B	B2RNN3	333 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	UPK3BL2	E5RIL1	263 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247		M0QYV0	167 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	TIMM44	O43615	452 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	C1QTNF9	P0C862	333 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	PRKCH	P24723	683 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	PPP1R2	P41236	205 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	HNRNPD	Q14103	355 aa	Known RBP	10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	TRIP4	Q15650	581 aa	Predicted RBP	10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	COBLL1	Q53SF7	1204 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	BSPRY	Q5W0U4	402 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	TMEM270	Q6UE05	265 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	TMPRSS6	Q8IU80	811 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	PPM1K	Q8N3J5	372 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	ZCCHC9	Q8N567	271 aa	Known RBP	10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	OR2I1P	Q8NGU4	316 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	WFIKKN2	Q8TEU8	576 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	SORCS1	Q8WY21	1168 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	SLC35C1	Q96A29	364 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	ZNF419	Q96HQ0	510 aa	Predicted RBP	10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	PIWIL1	Q96J94	861 aa	Known RBP	10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	SCNM1	Q9BWG6	230 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	ZDHHC5	Q9C0B5	715 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	MKRN2	Q9H000	416 aa	Known RBP	10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	CNGB3	Q9NQW8	809 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	ABCC13	Q9NSE7	274 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	USP36	Q9P275	1121 aa	Known RBP	10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	SFMBT1	Q9UHJ3	866 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	PLA2G4C	Q9UP65	541 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	PCDHB9	Q9Y5E1	797 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	PCDHB4	Q9Y5E5	795 aa		10.81	□□□□□ -0.68
UBE3A-223	ENST00000631247	CKAP5	Q14008	2032 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	ANKRD11	Q6UB99	2663 aa	Predicted RBP	10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247		A0A1B0GTW7	788 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	TYW5	A2RUC4	315 aa	Known RBP	10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	TMEM8B	A6NDV4	472 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	YJEFN3	A6XGL0	299 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247		E7ENQ6	273 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247		H0Y626	953 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247		O00370	1275 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	PIK3R2	O00459	728 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	MSI1	O43347	362 aa	Known RBP	10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	HYAL3	O43820	417 aa	Predicted RBP	10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	TRIM16	O95361	564 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	LATS1	O95835	1130 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	TOP3B	O95985	862 aa	Known RBP	10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	MAOB	P27338	520 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	HOXD9	P28356	352 aa	Predicted RBP	10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	CLCN1	P35523	988 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	SLC11A2	P49281	568 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	FMO5	P49326	533 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	RGS7	P49802	495 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	TPMT	P51580	245 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	PMS1	P54277	932 aa	Known RBP	10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	MCCD1	P59942	119 aa	Predicted RBP	10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	NUCB2	P80303	420 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	GRIK2	Q13002	908 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	ADGRF1	Q5T601	910 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	KLHL10	Q6JEL2	608 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	BHLHA9	Q7RTU4	235 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	PIP4P1	Q86T03	277 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	METTL3	Q86U44	580 aa	Known RBP	10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	FAM124A	Q86V42	546 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	FAM217A	Q8IXS0	508 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	ZC3H3	Q8IXZ2	948 aa	Known RBP	10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	AHI1	Q8N157	1196 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	ZNF557	Q8N988	423 aa	Predicted RBP	10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	CADM4	Q8NFZ8	388 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	SNX19	Q92543	992 aa		10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	ERCC4	Q92889	916 aa	Predicted RBP	10.8	□□□□□ -0.68
UBE3A-223	ENST00000631247	P2RY11	Q96G91	374 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms