RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SCUBE1Q8IWY4 988 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 FNDC5Q8NAU1 212 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 RNF208Q9H0X6 261 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 POLG2Q9UHN1 485 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 DUSP10Q9Y6W6 482 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 KANSL1LA0AUZ9 987 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 CNOT3O75175 753 aaKnown RBP12.02□□□□□ -0.49
SHPRH-211ENST00000629427 UMPSP11172 480 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 CPA3P15088 417 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 BDNFP23560 247 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 ATP12AP54707 1039 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 DPY30Q9C005 99 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 INO80Q9ULG1 1556 aaPredicted RBP12.02□□□□□ -0.49
SHPRH-211ENST00000629427 MT-CO1P00395 513 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 VHLP40337 213 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 SAMD3Q8N6K7 520 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 NOA1Q8NC60 698 aaKnown RBP12.02□□□□□ -0.49
SHPRH-211ENST00000629427 SPPL2AQ8TCT8 520 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 ATP8B4Q8TF62 1192 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 CATSPER2Q96P56 530 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 MRPS26Q9BYN8 205 aaKnown RBP12.02□□□□□ -0.49
SHPRH-211ENST00000629427 PABPC3Q9H361 631 aaKnown RBP12.02□□□□□ -0.49
SHPRH-211ENST00000629427 VPS51Q9UID3 782 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 MAGEB16A2A368 324 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 CHURC1-FNTBB4DL54 471 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 STX4Q12846 297 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 MTA1Q13330 715 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 C4orf19Q8IY42 314 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 UXS1Q8NBZ7 420 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 FIG4Q92562 907 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 BCL2L14Q9BZR8 327 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 ROGDIQ9GZN7 287 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 CCDC154A6NI56 674 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 SLCO1B7G3V0H7 640 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 TRIM13O60858 407 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 TRIM32Q13049 653 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 DDR2Q16832 855 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 CES5AQ6NT32 575 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 TATDN2Q93075 761 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 PAFAH2Q99487 392 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 ADAM30Q9UKF2 790 aa12.02□□□□□ -0.49
SHPRH-211ENST00000629427 USP31Q70CQ4 1352 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 F8VZ95 297 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 SH3BGRLO75368 114 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 CCR4P51679 360 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 AQP5P55064 265 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 CCDC92Q53HC0 331 aaPredicted RBP12.01□□□□□ -0.49
SHPRH-211ENST00000629427 TAF2Q6P1X5 1199 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 FBXL19Q6PCT2 694 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 FAM228AQ86W67 206 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 TRAPPC5Q8IUR0 188 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 OSGEPQ9NPF4 335 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 AVENQ9NQS1 362 aaPredicted RBP12.01□□□□□ -0.49
SHPRH-211ENST00000629427 AKR1A1P14550 325 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 ZNF7P17097 686 aaPredicted RBP12.01□□□□□ -0.49
SHPRH-211ENST00000629427 SLC1A6P48664 564 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 PPIL2Q13356 520 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 RETSATQ6NUM9 610 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 C11orf88Q6PI97 169 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 SYTL5Q8TDW5 730 aaPredicted RBP12.01□□□□□ -0.49
SHPRH-211ENST00000629427 RNFT2Q96EX2 444 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 RNPEPQ9H4A4 650 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 ZDHHC6Q9H6R6 413 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 DLGAP2Q9P1A6 1054 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 FAM25AB3EWG3 89 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 FAM25CB3EWG5 89 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 FAM25GB3EWG6 89 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 KRT6AP02538 564 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 KRT6BP04259 564 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 TALDO1P37837 337 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 KRT6CP48668 564 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 RALGDSQ12967 914 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 ACVR2BQ13705 512 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 TAF13Q15543 124 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 MOXD1Q6UVY6 613 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 DET1Q7L5Y6 550 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 RNASE11Q8TAA1 199 aaKnown RBP12.01□□□□□ -0.49
SHPRH-211ENST00000629427 APBA2Q99767 749 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 FAM153AQ9UHL3 310 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 MOXD2PA6NHM9 499 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 PSEN2P49810 448 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 TROAPQ12815 778 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 LLGL2Q6P1M3 1020 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 REPS2Q8NFH8 660 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 PNMA5Q96PV4 448 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 DDTLA6NHG4 134 aaPredicted RBP12.01□□□□□ -0.49
SHPRH-211ENST00000629427 LRRC14BA6NHZ5 514 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 TSC22D2O75157 780 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 NR2C2P49116 596 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 ALDH5A1P51649 535 aaPredicted RBP12.01□□□□□ -0.49
SHPRH-211ENST00000629427 THOP1P52888 689 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 CDH8P55286 799 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 SKP1P63208 163 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 IL5RAQ01344 420 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 KCNMA1Q12791 1236 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 COX10Q12887 443 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 IKBKEQ14164 716 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 RASA2Q15283 850 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 KCNMB4Q86W47 210 aa12.01□□□□□ -0.49
SHPRH-211ENST00000629427 ABHD16BQ9H3Z7 469 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms