RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SERPINB1P30740 379 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 BTG3Q14201 252 aaPredicted RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 CCDC153Q494R4 210 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 NT5DC1Q5TFE4 455 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 LZTR1Q8N653 840 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 ELOVL4Q9GZR5 314 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 ATXN3LQ9H3M9 355 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 NFASCO94856 1347 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 RGS5O15539 181 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 FGFR1P11362 822 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 CCDC130P13994 396 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 SLC12A3P55017 1021 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 TRAF2Q12933 501 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 PLD1Q13393 1074 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 ZCWPW2Q504Y3 356 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 SPANXN3Q5MJ09 141 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 BLOC1S4Q9NUP1 217 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 A0A087X0B3 334 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 TMEM114B3SHH9 223 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 ANKRD63C9JTQ0 380 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 YBX3P16989 372 aaKnown RBP eCLIP13.1□□□□□ -0.31
SCN8A-209ENST00000627620 CASP7P55210 303 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 PRKAA1Q13131 559 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 ACVR2BQ13705 512 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 MTSS1LQ765P7 747 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 LGI2Q8N0V4 545 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 TMEM159Q96B96 161 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 CCDC3Q9BQI4 270 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 DPY30Q9C005 99 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 RERGLQ9H628 205 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 AP4S1Q9Y587 144 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 NWD1Q149M9 1564 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 SALL3Q9BXA9 1300 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 KCNK1O00180 336 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 SERPINE1P05121 402 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 ZNF7P17097 686 aaPredicted RBP13.1□□□□□ -0.31
SCN8A-209ENST00000627620 PTPN4P29074 926 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 SSTR1P30872 391 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 ADCYAP1R1P41586 468 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 SKIV2L2P42285 1042 aaKnown RBP13.1□□□□□ -0.31
SCN8A-209ENST00000627620 AMPD2Q01433 879 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 SLC39A12Q504Y0 691 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 ZNF470Q6ECI4 717 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 DPF3Q92784 378 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 VPS33AQ96AX1 596 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 SERAC1Q96JX3 654 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 TBL1YQ9BQ87 522 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 GLIS2Q9BZE0 524 aaPredicted RBP13.1□□□□□ -0.31
SCN8A-209ENST00000627620 RRAGCQ9HB90 399 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 AP5Z1O43299 807 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 SERPINI2O75830 405 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 VAPBO95292 243 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 CCT8P50990 548 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 NUP107P57740 925 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 VAC14Q08AM6 782 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 ALFQ53S48 1182 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 DACT2Q5SW24 774 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 ARHGAP17Q68EM7 881 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 CES3Q6UWW8 571 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 FBXO39Q8N4B4 442 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 TCP10LQ8TDR4 215 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 MAGED4Q96JG8 741 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 CPNE1Q99829 537 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 TRPC4Q9UBN4 977 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 GTF2A1LQ9UNN4 478 aa13.1□□□□□ -0.31
SCN8A-209ENST00000627620 RAD51BO15315 384 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 UBOX5O94941 541 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 RTN3O95197 1032 aaPredicted RBP13.09□□□□□ -0.31
SCN8A-209ENST00000627620 MIPP30301 263 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 DEFB107AQ8IZN7 70 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 TRPV2Q9Y5S1 764 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 MRPL42Q9Y6G3 142 aaKnown RBP13.09□□□□□ -0.31
SCN8A-209ENST00000627620 GAKO14976 1311 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 NCOA3Q9Y6Q9 1424 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 ZSCAN5CA6NGD5 496 aaPredicted RBP13.09□□□□□ -0.31
SCN8A-209ENST00000627620 EIF4BP23588 611 aaKnown RBP13.09□□□□□ -0.31
SCN8A-209ENST00000627620 CRABP2P29373 138 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 ALDH9A1P49189 494 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 FSCN1Q16658 493 aaKnown RBP13.09□□□□□ -0.31
SCN8A-209ENST00000627620 SYTL1Q8IYJ3 562 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 KYQ8NBH2 561 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 DCLRE1BQ9H816 532 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 A1CFQ9NQ94 594 aaKnown RBP13.09□□□□□ -0.31
SCN8A-209ENST00000627620 AVENQ9NQS1 362 aaPredicted RBP13.09□□□□□ -0.31
SCN8A-209ENST00000627620 DNPEPQ9ULA0 475 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 SNX8Q9Y5X2 465 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 AK9Q5TCS8 1911 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 MROH7Q68CQ1 1323 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 MAP3K13O43283 966 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 GJB6O95452 261 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 USP17L7P0C7H9 530 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 ERVK-9P63128 1117 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 BOP1Q14137 746 aaKnown RBP13.09□□□□□ -0.31
SCN8A-209ENST00000627620 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 ZBTB49Q6ZSB9 765 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 ZFPM1Q8IX07 1006 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 ATG16L2Q8NAA4 619 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 KLHL4Q9C0H6 718 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 NMRAL1Q9HBL8 299 aa13.09□□□□□ -0.31
SCN8A-209ENST00000627620 RXFP1Q9HBX9 757 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms