RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 PRSS51A0A1B0GVH4 220 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 CCDC162PA2VCL2 907 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 CAPN8A6NHC0 703 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 SOBPA7XYQ1 873 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 F8VP50 259 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 H3BSA7 217 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 MATN2O00339 956 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 MCF2LO15068 1137 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 EXTL3O43909 919 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 CST8O60676 142 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 CLASP2O75122 1294 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 LGR5O75473 907 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 BMP10O95393 424 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 ZBED1O96006 694 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 LDHAP00338 332 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 GSRP00390 522 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 ALDH2P05091 517 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 ICAM1P05362 532 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 THRAP10827 490 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 FGF3P11487 239 aaPredicted RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 COX4I1P13073 169 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 TCF4P15884 667 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 VARSP26640 1264 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 SERPINB6P35237 376 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 GJC1P36383 396 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 HARS2P49590 506 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 HK2P52789 917 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 AP3M2P53677 418 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 EPHB1P54762 984 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 YWHAGP61981 247 aaKnown RBP eCLIP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 PSMC5P62195 406 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 RPL7AP62424 266 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 FOXK2Q01167 660 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 OGDHQ02218 1023 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 SLC25A11Q02978 314 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 NAB1Q13506 487 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 DPYSQ14117 519 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 LPIN1Q14693 890 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 NOMO1Q15155 1222 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 FASTKD1Q53R41 847 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 MDH1BQ5I0G3 518 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 ZFYVE27Q5T4F4 411 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 MBLAC2Q68D91 279 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 DNAJC24Q6P3W2 148 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 C16orf89Q6UX73 402 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 DENND5BQ6ZUT9 1274 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 PATL1Q86TB9 770 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 ADGRF2Q8IZF7 708 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 DEFB107AQ8IZN7 70 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 PPM1NQ8N819 430 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 TMEM35BQ8NCS4 154 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 RDM1Q8NG50 284 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 HM13Q8TCT9 377 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 TFB1MQ8WVM0 346 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 ABTB1Q969K4 478 aaPredicted RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 DUS3LQ96G46 650 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 ZNF778Q96MU6 729 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 MECRQ9BV79 373 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 ZNF341Q9BYN7 854 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 GCOM2Q9BZD3 368 aaPredicted RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 GRIP2Q9C0E4 1043 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 RSAD1Q9HA92 442 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 KMT5AQ9NQR1 393 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 CYP26B1Q9NR63 512 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 TOPORSQ9NS56 1045 aaPredicted RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 TBC1D22BQ9NU19 505 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 DDX18Q9NVP1 670 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 MAP3K20Q9NYL2 800 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 DCDC2Q9UHG0 476 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 PTBP2Q9UKA9 531 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 GNEQ9Y223 722 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 DNAJC16Q9Y2G8 782 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 TMED5Q9Y3A6 229 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 PPP2R3BQ9Y5P8 575 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 RGSL1A5PLK6 1076 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 CCDC160A6NGH7 325 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 CITO14578 2027 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 DKC1O60832 514 aaKnown RBP eCLIP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 PDE5AO76074 875 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 VNN1O95497 513 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 CFBP00751 764 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 CALCAP01258 141 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 PIGRP01833 764 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 SERPINE1P05121 402 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 CFHP08603 1231 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 SRGAP2CP0DJJ0 459 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 SRGAP2BP0DMP2 458 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 KITP10721 976 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 RBP3P10745 1247 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 ZNF12P17014 697 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 PSMC3P17980 439 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 TPSB2P20231 275 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 PCSK6P29122 969 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 POLR2BP30876 1174 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 YWHABP31946 246 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 SFNP31947 248 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 TTKP33981 857 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 PPARGP37231 505 aaPredicted RBP4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 NPTX2P47972 431 aa4.29□□□□□ -1.72
PTP4A1-205ENST00000626021 IDH3AP50213 366 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms