RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 SPATA13Q96N96 652 aa11.6□□□□□ -0.55
VARS2-213ENST00000625423 EIF2AQ9BY44 585 aaKnown RBP11.6□□□□□ -0.55
VARS2-213ENST00000625423 PSAT1Q9Y617 370 aa11.6□□□□□ -0.55
VARS2-213ENST00000625423 USP3Q9Y6I4 520 aa11.6□□□□□ -0.55
VARS2-213ENST00000625423 SPDYE5A6NIY4 337 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 CXCL11O14625 94 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 MFSD11O43934 449 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 ALDH1A2O94788 518 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 FGF3P11487 239 aaPredicted RBP11.59□□□□□ -0.55
VARS2-213ENST00000625423 ARL4AP40617 200 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 NIPAL4Q0D2K0 466 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 TEDDM1Q5T9Z0 273 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 ARHGAP17Q68EM7 881 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 MAMDC4Q6UXC1 1216 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 CYS1Q717R9 158 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 NET1Q7Z628 596 aaPredicted RBP11.59□□□□□ -0.55
VARS2-213ENST00000625423 WDR75Q8IWA0 830 aaKnown RBP11.59□□□□□ -0.55
VARS2-213ENST00000625423 KBTBD2Q8IY47 623 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 ANKRD52Q8NB46 1076 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 ARNTL2Q8WYA1 636 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 OLFM3Q96PB7 478 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 C16orf70Q9BSU1 422 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 MROH8Q9H579 483 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 TMPRSS4Q9NRS4 437 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 KRT82Q9NSB4 513 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 SEPT10Q9P0V9 454 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 MORF4L1Q9UBU8 362 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 SLC7A8Q9UHI5 535 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 GJD2Q9UKL4 321 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 H3BRB1 525 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 CIB2O75838 187 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 TOMM70O94826 608 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 HOXA11P31270 313 aaPredicted RBP11.59□□□□□ -0.55
VARS2-213ENST00000625423 GMPRP36959 345 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 FDFT1P37268 417 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 ADCYAP1R1P41586 468 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 SLC1A6P48664 564 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 MARCH8Q5T0T0 291 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 DPY19L2Q6NUT2 758 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 IRGCQ6NXR0 463 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 LRRC8BQ6P9F7 803 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 CES3Q6UWW8 571 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 UNC93AQ86WB7 457 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 PIWIL2Q8TC59 973 aaKnown RBP11.59□□□□□ -0.55
VARS2-213ENST00000625423 CDKL2Q92772 493 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 SNX27Q96L92 541 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 TUT1Q9H6E5 874 aaKnown RBP11.59□□□□□ -0.55
VARS2-213ENST00000625423 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.59□□□□□ -0.553e-6■□□□□ 10
VARS2-213ENST00000625423 DLGAP2Q9P1A6 1054 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 SYNJ2BP-COX16A0A087WUM0 186 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 E2F8A0AVK6 867 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 F8W8V4 182 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 MAP3K7O43318 606 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 PLIN3O60664 434 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 C6orf222P0C671 652 aaPredicted RBP11.59□□□□□ -0.55
VARS2-213ENST00000625423 BCAT1P54687 386 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 DNAL1Q4LDG9 190 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 PPM1JQ5JR12 505 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 ZNF618Q5T7W0 954 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 C9orf131Q5VYM1 1079 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 ATG14Q6ZNE5 492 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 SLC25A41Q8N5S1 370 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 BEST2Q8NFU1 509 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 PPTC7Q8NI37 304 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 SHKBP1Q8TBC3 707 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 PGLYRP2Q96PD5 576 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 COX16Q9P0S2 106 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 GTF2IRD1Q9UHL9 959 aa11.59□□□□□ -0.55
VARS2-213ENST00000625423 TRIP11Q15643 1979 aa11.58□□□□□ -0.55
VARS2-213ENST00000625423 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.58□□□□□ -0.56
VARS2-213ENST00000625423 RNF103O00237 685 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 GLRA3O75311 464 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 MLNP12872 115 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 PDE1BQ01064 536 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 TUBB3Q13509 450 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 ZRSR2Q15696 482 aaKnown RBP11.58□□□□□ -0.56
VARS2-213ENST00000625423 TBCCQ15814 346 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 ZBTB6Q15916 424 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 GRIK4Q16099 956 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 TRMT5Q32P41 509 aaKnown RBP11.58□□□□□ -0.56
VARS2-213ENST00000625423 DCAF4L1Q3SXM0 396 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 C6orf163Q5TEZ5 329 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 C1orf146Q5VVC0 180 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 SLC2A14Q8TDB8 520 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 FAM149B1Q96BN6 582 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 P2RY11Q96G91 374 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 SYT17Q9BSW7 474 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 PLEKHA5Q9HAU0 1116 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 SYBUQ9NX95 663 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 HACD1B0YJ81 288 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 ITGA2BP08514 1039 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 ANPEPP15144 967 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 PSMB4P28070 264 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 GNL1P36915 607 aaPredicted RBP11.58□□□□□ -0.56
VARS2-213ENST00000625423 SULT1E1P49888 294 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 ACTR3P61158 418 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 PITX1P78337 314 aaPredicted RBP11.58□□□□□ -0.56
VARS2-213ENST00000625423 SLC25A3Q00325 362 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 PCLAFQ15004 111 aa11.58□□□□□ -0.56
VARS2-213ENST00000625423 STXBP5Q5T5C0 1151 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms