RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 PODNQ7Z5L7 613 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 ANKS1BQ7Z6G8 1248 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 HACE1Q8IYU2 909 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 SLC38A6Q8IZM9 456 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 SPARTQ8N0X7 666 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 ZNF564Q8TBZ8 553 aaPredicted RBP7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 OSCP1Q8WVF1 389 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 TRIB2Q92519 343 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 HSPH1Q92598 858 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 DHX38Q92620 1227 aaKnown RBP7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 RMND5BQ96G75 393 aaPredicted RBP7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 PRMT6Q96LA8 375 aaPredicted RBP7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 ALPK1Q96QP1 1244 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 AIFM2Q9BRQ8 373 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 C17orf80Q9BSJ5 609 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 C1orf50Q9BV19 199 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 TEKT3Q9BXF9 490 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 GLIS2Q9BZE0 524 aaPredicted RBP7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 HOXD1Q9GZZ0 328 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 RMND5AQ9H871 391 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 THG1LQ9NWX6 298 aaKnown RBP7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 HSPBP1Q9NZL4 362 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 PPARGC1AQ9UBK2 798 aaKnown RBP7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 CDH22Q9UJ99 828 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 PTBP2Q9UKA9 531 aaKnown RBP7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 ITGA11Q9UKX5 1188 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 PCDHGB4Q9UN71 923 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 SLC8A2Q9UPR5 921 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 POMPQ9Y244 141 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 PPME1Q9Y570 386 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 PCDHGB5Q9Y5G0 923 aa7.71□□□□□ -1.17
TRIM49B-202ENST00000622138 A0A087WXM4 84 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 CLDN3O15551 220 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 MSI1O43347 362 aaKnown RBP7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 NUAK1O60285 661 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 FAM189A1O60320 539 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 NPM3O75607 178 aaKnown RBP7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 MTA2O94776 668 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 RFX1P22670 979 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 MAGEA4P43358 317 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 ZNF132P52740 706 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 IGBP1P78318 339 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 NIPAL4Q0D2K0 466 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 CCDC58Q4VC31 144 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 LMBRD2Q68DH5 695 aaPredicted RBP7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 LLGL2Q6P1M3 1020 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 STXBP4Q6ZWJ1 553 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 IGFN1Q86VF2 1251 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 CBWD2Q8IUF1 395 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 FAM71AQ8IYT1 594 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 ZCCHC9Q8N567 271 aaKnown RBP7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 KCTD17Q8N5Z5 321 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 C1orf54Q8WWF1 131 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 CAPSLQ8WWF8 208 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 ATG4AQ8WYN0 398 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 TTC9Q92623 222 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 ATP2A3Q93084 1043 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 PWWP2AQ96N64 755 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 KCNK16Q96T55 309 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 KIFC3Q9BVG8 833 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 RNF38Q9H0F5 515 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 SMARCAD1Q9H4L7 1026 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 RUBCNLQ9H714 662 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 ZFYVE28Q9HCC9 887 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 TBC1D14Q9P2M4 693 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 BCAP29Q9UHQ4 241 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 RIMS3Q9UJD0 308 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 MOSPD1Q9UJG1 213 aa7.71□□□□□ -1.18
TRIM49B-202ENST00000622138 CLRN2A0PK11 232 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 B8ZZF3 427 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 TCP10L2B9ZVM9 353 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 H3BMQ9 156 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 ARHGAP33O14559 1287 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 GIPC1O14908 333 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 XPO1O14980 1071 aaKnown RBP7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 SLC16A4O15374 487 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 DHX15O43143 795 aaKnown RBP7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 NOL3O60936 208 aaKnown RBP7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 TMCC2O75069 709 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 CYP1A2P05177 515 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 PLS3P13797 630 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 FOSL1P15407 271 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 NAGAP17050 411 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 PRKCAP17252 672 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 DDX5P17844 614 aaKnown RBP7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 NDST2P52849 883 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 TPTEP56180 551 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 P2RX3P56373 397 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 STX1BP61266 288 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 GALNT2Q10471 571 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 AOC3Q16853 763 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 EFHC2Q5JST6 749 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 PLEKHA7Q6IQ23 1121 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 ANKRD26P1Q6NSI1 321 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 TRMT1LQ7Z2T5 733 aaKnown RBP7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 PRUNE1Q86TP1 453 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 SETD3Q86TU7 594 aaPredicted RBP7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 CARM1Q86X55 608 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 GALNT13Q8IUC8 556 aa7.7□□□□□ -1.18
TRIM49B-202ENST00000622138 KIAA2013Q8IYS2 634 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms