RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 C12orf65Q9H3J6 166 aaKnown RBP18.03■□□□□ 0.48
FAM3A-222ENST00000621967 SLC38A7Q9NVC3 462 aa18.03■□□□□ 0.48
FAM3A-222ENST00000621967 UBQLN1Q9UMX0 589 aaKnown RBP18.03■□□□□ 0.48
FAM3A-222ENST00000621967 IKBKGQ9Y6K9 419 aa18.03■□□□□ 0.48
FAM3A-222ENST00000621967 APOL1O14791 398 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 KCNN4O15554 427 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 GRAP2O75791 330 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 INHBAP08476 426 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 RASSF2P50749 326 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 AFF1P51825 1210 aaKnown RBP18.02■□□□□ 0.48
FAM3A-222ENST00000621967 YWHAGP61981 247 aaKnown RBP eCLIP18.02■□□□□ 0.48
FAM3A-222ENST00000621967 GRIK3Q13003 919 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 CTC1Q2NKJ3 1217 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 NOMO2Q5JPE7 1267 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 PMF1Q6P1K2 205 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 FAM117BQ6P1L5 589 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 TMEM110Q86TL2 294 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 CRIPAKQ8N1N5 446 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 C12orf29Q8N999 325 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 GSTCDQ8NEC7 633 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 BEST2Q8NFU1 509 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 PCDH19Q8TAB3 1148 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 ZNF670Q9BS34 389 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 SNRNP25Q9BV90 132 aaKnown RBP18.02■□□□□ 0.48
FAM3A-222ENST00000621967 TLE6Q9H808 572 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 POPDC2Q9HBU9 364 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 RAB6BQ9NRW1 208 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 LNPEPQ9UIQ6 1025 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 SLC4A7Q9Y6M7 1214 aa18.02■□□□□ 0.48
FAM3A-222ENST00000621967 WDR91A4D1P6 747 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 HNRNPCL1O60812 293 aaKnown RBP18.02■□□□□ 0.47
FAM3A-222ENST00000621967 TGDSO95455 350 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 BCAR1P56945 870 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 SLC6A3Q01959 620 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 TAF1BQ53T94 588 aaPredicted RBP18.02■□□□□ 0.47
FAM3A-222ENST00000621967 PPP1R26Q5T8A7 1209 aaPredicted RBP18.02■□□□□ 0.47
FAM3A-222ENST00000621967 CLNKQ7Z7G1 428 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 SLC26A11Q86WA9 606 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 TTC30AQ86WT1 665 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 FAM172AQ8WUF8 416 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 RSPH1Q8WYR4 309 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 CXXC1Q9P0U4 656 aaPredicted RBP18.02■□□□□ 0.47
FAM3A-222ENST00000621967 TUBGCP4Q9UGJ1 667 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 ZFP69BQ9UJL9 534 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 ZNF180Q9UJW8 692 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 NUMBLQ9Y6R0 609 aa18.02■□□□□ 0.47
FAM3A-222ENST00000621967 INPPL1O15357 1258 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 AVILO75366 819 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 PRKCHP24723 683 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 RBL1P28749 1068 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 RGS7P49802 495 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 GATMP50440 423 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 PRKD1Q15139 912 aaPredicted RBP18.01■□□□□ 0.47
FAM3A-222ENST00000621967 C4orf22Q6V702 233 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 TMCO2Q7Z6W1 182 aaPredicted RBP18.01■□□□□ 0.47
FAM3A-222ENST00000621967 PRPF39Q86UA1 669 aaKnown RBP18.01■□□□□ 0.47
FAM3A-222ENST00000621967 CAND1Q86VP6 1230 aaKnown RBP18.01■□□□□ 0.47
FAM3A-222ENST00000621967 RFWD2Q8NHY2 731 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 NSMCE1Q8WV22 266 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 SLC35F5Q8WV83 523 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 C18orf25Q96B23 403 aaPredicted RBP18.01■□□□□ 0.47
FAM3A-222ENST00000621967 PPP1R10Q96QC0 940 aaKnown RBP18.01■□□□□ 0.47
FAM3A-222ENST00000621967 TSSK1BQ9BXA7 367 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 TBC1D10AQ9BXI6 508 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 MRPL9Q9BYD2 267 aaKnown RBP18.01■□□□□ 0.47
FAM3A-222ENST00000621967 TRIM55Q9BYV6 548 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 PLAC1Q9HBJ0 212 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 NGRNQ9NPE2 291 aaKnown RBP18.01■□□□□ 0.47
FAM3A-222ENST00000621967 ETNK2Q9NVF9 386 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 GPATCH2LQ9NWQ4 482 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 MIOSQ9NXC5 875 aa18.01■□□□□ 0.47
FAM3A-222ENST00000621967 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.01■□□□□ 0.47
FAM3A-222ENST00000621967 MYO18AQ92614 2054 aaKnown RBP18.01■□□□□ 0.47
FAM3A-222ENST00000621967 TDRD15B5MCY1 1934 aaKnown RBP18■□□□□ 0.47
FAM3A-222ENST00000621967 TBKBP1A7MCY6 615 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 TRDMT1O14717 391 aaKnown RBP18■□□□□ 0.47
FAM3A-222ENST00000621967 CBX6O95503 412 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 ZBED1O96006 694 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 GSTA2P09210 222 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 SDC4P31431 198 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 RGS19P49795 217 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 CCNG1P51959 295 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 CA9Q16790 459 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 TTC39BQ5VTQ0 682 aaPredicted RBP18■□□□□ 0.47
FAM3A-222ENST00000621967 MCUQ8NE86 351 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 N4BP2L2Q92802 583 aaPredicted RBP18■□□□□ 0.47
FAM3A-222ENST00000621967 LRRC39Q96DD0 335 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 SLC9A7Q96T83 725 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 KLC2Q9H0B6 622 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 CXorf56Q9H5V9 222 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 RPL26L1Q9UNX3 145 aaKnown RBP18■□□□□ 0.47
FAM3A-222ENST00000621967 KLF11O14901 512 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 PAPSS1O43252 624 aaPredicted RBP18■□□□□ 0.47
FAM3A-222ENST00000621967 DNAJC6O75061 913 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 GABBR2O75899 941 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 DGKIO75912 1065 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 PYGBP11216 843 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 MAGEA3P43357 314 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 HDAC4P56524 1084 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 ZBTB6Q15916 424 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms