RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 MCL1Q07820 350 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 GALNTL6Q49A17 601 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 WSCD1Q658N2 575 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 GLT6D1Q7Z4J2 308 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 IFNLR1Q8IU57 520 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 ABRAQ8N0Z2 381 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 DEFB106AQ8N104 65 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 ICA1LQ8NDH6 482 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 ADAM32Q8TC27 787 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 KLRG1Q96E93 195 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 ADNPQ9H2P0 1102 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 IL1RL2Q9HB29 575 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 CRYL1Q9Y2S2 319 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 RAD54BQ9Y620 910 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 NUDT14O95848 222 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 DNTTP04053 509 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 PRLRP16471 622 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 ZNF268Q14587 947 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 SETD3Q86TU7 594 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 KIAA0319LQ8IZA0 1049 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 PORCNQ9H237 461 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 CARD9Q9H257 536 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 IL17RBQ9NRM6 502 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 LRRC4BQ9NT99 713 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 KLHL28Q9NXS3 571 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 TRPC4Q9UBN4 977 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 NUDT5Q9UKK9 219 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 RUVBL2Q9Y230 463 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 KLHL2O95198 593 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 MAPK8P45983 427 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 MRPS35P82673 323 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 CCDC60Q8IWA6 550 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 SMG7Q92540 1137 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 OSBPL10Q9BXB5 764 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 ULBP1Q9BZM6 244 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 KCND1Q9NSA2 647 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 SALL3Q9BXA9 1300 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 KRT6AP02538 564 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 KRT6BP04259 564 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 CCDC130P13994 396 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 PPP2R1BP30154 601 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 RPL9P32969 192 aaKnown RBP10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 KRT6CP48668 564 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 GLUD2P49448 558 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 GRIK3Q13003 919 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 ALFQ53S48 1182 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 DCLRE1AQ6PJP8 1040 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 GET4Q7L5D6 327 aaPredicted RBP10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 PLPPR4Q7Z2D5 763 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 APBB2Q92870 758 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 BBS2Q9BXC9 721 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 ROPN1BQ9BZX4 212 aaPredicted RBP10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 ROPN1Q9HAT0 212 aaPredicted RBP10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 GTF2A1LQ9UNN4 478 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 GIT1Q9Y2X7 761 aa10.02□□□□□ -0.8
CLTCL1-211ENST00000621271 TMEM150BA6NC51 233 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 BTBD19C9JJ37 291 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 MICAL2O94851 1124 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 TM4SF1P30408 202 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 HSD17B3P37058 310 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 ZNF135P52742 658 aaPredicted RBP10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 CDH17Q12864 832 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 CYP2A13Q16696 494 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 CYP51A1Q16850 503 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 ZCCHC8Q6NZY4 707 aaKnown RBP10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 C15orf52Q6ZUT6 534 aaKnown RBP10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 MARK2Q7KZI7 788 aaKnown RBP10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 CATSPER1Q8NEC5 780 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 E2F7Q96AV8 911 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 KCNK16Q96T55 309 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 ILKAPQ9H0C8 392 aaPredicted RBP10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 CDH9Q9ULB4 789 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 O00370 1275 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 AIM2O14862 343 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 YBX3P16989 372 aaKnown RBP eCLIP10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 PGM1P36871 562 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 C1QBPQ07021 282 aaKnown RBP10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 PWP1Q13610 501 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 SPRYD7Q5W111 196 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 SCUBE3Q8IX30 993 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 RIBC1Q8N443 379 aaPredicted RBP10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 CPA6Q8N4T0 437 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 COLGALT1Q8NBJ5 622 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 LRRN4CLQ8ND94 238 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 ZNF606Q8WXB4 792 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 LPPQ93052 612 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 ERP44Q9BS26 406 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 PRKD2Q9BZL6 878 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 TKTL2Q9H0I9 626 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 GANQ9H2C0 597 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 NPHS2Q9NP85 383 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 STK39Q9UEW8 545 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 ZMYND8Q9ULU4 1186 aaPredicted RBP10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 CCDC189A1A4V9 331 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 MAGEB16A2A368 324 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 TBC1D4O60343 1298 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 GLRA3O75311 464 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 AKAP3O75969 853 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 PROSCO94903 275 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms