RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 AMHP03971 560 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 ERCC2P18074 760 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 DSC1Q08554 894 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 CTAGE3PQ8IX95 158 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 TTC9BQ8N6N2 239 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 GDAP1Q8TB36 358 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 MIEF2Q96C03 454 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 EPAS1Q99814 870 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 GPR62Q9BZJ7 368 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 OR12D3Q9UGF7 316 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 A0A1W2PQH9 124 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 BCLAF3A2AJT9 711 aaKnown RBP10.25□□□□□ -0.77
VTA1-205ENST00000620996 EME2A4GXA9 379 aaPredicted RBP10.25□□□□□ -0.77
VTA1-205ENST00000620996 RASA4BC9J798 803 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 RNF103O00237 685 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 RASA4O43374 803 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 CDH16O75309 829 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 METTL18O95568 372 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 HMBSP08397 361 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 BRAFP15056 766 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 NR2C2P49116 596 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 SLC11A1P49279 550 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 TCTN1Q2MV58 587 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 ZNF280DQ6N043 979 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 PPP1R21Q6ZMI0 780 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 BZW1Q7L1Q6 419 aaKnown RBP10.25□□□□□ -0.77
VTA1-205ENST00000620996 EXOC3L1Q86VI1 746 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 FBF1Q8TES7 1133 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 AGAP3Q96P47 875 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 QKIQ96PU8 341 aaKnown RBP eCLIP10.25□□□□□ -0.77
VTA1-205ENST00000620996 PRDM12Q9H4Q4 367 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 CNOT10Q9H9A5 744 aaKnown RBP10.25□□□□□ -0.77
VTA1-205ENST00000620996 CSNK1G1Q9HCP0 422 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 KLHL8Q9P2G9 620 aaPredicted RBP10.25□□□□□ -0.77
VTA1-205ENST00000620996 FBXW11Q9UKB1 542 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 IKBKGQ9Y6K9 419 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 ALOX15BO15296 676 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 SPAG7O75391 227 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 CPP00450 1065 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 F9P00740 461 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 VAV1P15498 845 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 CA8P35219 290 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 NUMBP49757 651 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 PGFP49763 221 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 FAM189BP81408 668 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 TRIM60Q495X7 471 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 PLEKHG4Q58EX7 1191 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 WDR6Q9NNW5 1121 aaKnown RBP10.24□□□□□ -0.77
VTA1-205ENST00000620996 PRDM5Q9NQX1 630 aaPredicted RBP10.24□□□□□ -0.77
VTA1-205ENST00000620996 PCDHB5Q9Y5E4 795 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 DFFAO00273 331 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 CCNHP51946 323 aaPredicted RBP10.24□□□□□ -0.77
VTA1-205ENST00000620996 TLE2Q04725 743 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 PDK1Q15118 436 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 NFE2Q16621 373 aaPredicted RBP10.24□□□□□ -0.77
VTA1-205ENST00000620996 PDZD4Q76G19 769 aaPredicted RBP10.24□□□□□ -0.77
VTA1-205ENST00000620996 PID1Q7Z2X4 250 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 CPLX4Q7Z7G2 160 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 MIB1Q86YT6 1006 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 C4orf33Q8N1A6 199 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 PRMT1Q99873 361 aaKnown RBP10.24□□□□□ -0.77
VTA1-205ENST00000620996 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.24□□□□□ -0.77
VTA1-205ENST00000620996 TMEM120BA0PK00 339 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 A6NNZ2 444 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 CSPG5O95196 566 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 VIMP08670 466 aaKnown RBP10.24□□□□□ -0.77
VTA1-205ENST00000620996 CDK7P50613 346 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 TUBB8Q3ZCM7 444 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 ANKRD20A2Q5SQ80 823 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 ANKRD20A1Q5TYW2 823 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 ANKRD20A3Q5VUR7 823 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 AP1ARQ63HQ0 302 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 FUT10Q6P4F1 479 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 PRSS55Q6UWB4 352 aaPredicted RBP10.24□□□□□ -0.77
VTA1-205ENST00000620996 TMCO2Q7Z6W1 182 aaPredicted RBP10.24□□□□□ -0.77
VTA1-205ENST00000620996 NLRP14Q86W24 1093 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 ZNF354CQ86Y25 554 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 NPAS4Q8IUM7 802 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 COLGALT1Q8NBJ5 622 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 USP33Q8TEY7 942 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 GIPC2Q8TF65 315 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 NT5C3BQ969T7 300 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 P2RY11Q96G91 374 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 CASD1Q96PB1 797 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 TMEM109Q9BVC6 243 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 EPN3Q9H201 632 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 SLC12A6Q9UHW9 1150 aa10.24□□□□□ -0.77
VTA1-205ENST00000620996 SF3B1O75533 1304 aaKnown RBP eCLIP10.23□□□□□ -0.777e-7■■■■■ 119.6
VTA1-205ENST00000620996 I6L893 689 aaPredicted RBP10.23□□□□□ -0.77
VTA1-205ENST00000620996 CHADO15335 359 aa10.23□□□□□ -0.77
VTA1-205ENST00000620996 RPL17P18621 184 aaKnown RBP10.23□□□□□ -0.77
VTA1-205ENST00000620996 GBP2P32456 591 aaPredicted RBP10.23□□□□□ -0.77
VTA1-205ENST00000620996 ELF1P32519 619 aa10.23□□□□□ -0.77
VTA1-205ENST00000620996 MSH2P43246 934 aa10.23□□□□□ -0.77
VTA1-205ENST00000620996 SESN2P58004 480 aaPredicted RBP10.23□□□□□ -0.77
VTA1-205ENST00000620996 GPX6P59796 221 aa10.23□□□□□ -0.77
VTA1-205ENST00000620996 EFEMP1Q12805 493 aa10.23□□□□□ -0.77
VTA1-205ENST00000620996 SPARCL1Q14515 664 aa10.23□□□□□ -0.77
VTA1-205ENST00000620996 KCNJ11Q14654 390 aa10.23□□□□□ -0.77
VTA1-205ENST00000620996 GPNMBQ14956 572 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms