RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 BHLHB9Q6PI77 547 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 DSG4Q86SJ6 1040 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 PQLC1Q8N2U9 271 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 FBXO30Q8TB52 745 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 PANX3Q96QZ0 392 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 C14orf119Q9NWQ9 140 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 EDARQ9UNE0 448 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 HTR2BP41595 481 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 PPM1JQ5JR12 505 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 TAF2Q6P1X5 1199 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 TPTE2Q6XPS3 522 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 PHF21BQ96EK2 531 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 VAPBO95292 243 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 ME2P23368 584 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 LRRC8DQ7L1W4 858 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 FAM96AQ9H5X1 160 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 ERVK-11Q9UQG0 969 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 ABCB11O95342 1321 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 RRN3P2A6NIE6 340 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 K7EPI3 171 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 ATG7O95352 703 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 TSPAN19P0C672 248 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 RAP1GAPP47736 663 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 CSNK2BP67870 215 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 ECT2LQ008S8 904 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 KRR1Q13601 381 aaKnown RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 OR52E8Q6IFG1 317 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 TTC27Q6P3X3 843 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 CIR1Q86X95 450 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 ZC3H7AQ8IWR0 971 aaKnown RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 GHDCQ8N2G8 530 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 SMYD1Q8NB12 490 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 CPSF3Q9UKF6 684 aaKnown RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 MYOM2P54296 1465 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 PTPN7P35236 360 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 SLC26A3P40879 764 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 SLC1A1P43005 524 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 DLG2Q15700 870 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 ZBTB38Q8NAP3 1195 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 SLC7A3Q8WY07 619 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 FERD3LQ96RJ6 166 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 XYLBO75191 536 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 SLC15A2Q16348 729 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 MICALL2Q8IY33 904 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 FNIP1Q8TF40 1166 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 CLEC4MQ9H2X3 399 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 SERHL2Q9H4I8 314 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 TCF7L2Q9NQB0 619 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 SERHLQ9NQF3 203 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 MLXQ9UH92 298 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 RECQL5O94762 991 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 NCK1P16333 377 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 GNAZP19086 355 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 SKIV2L2P42285 1042 aaKnown RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 CDK8P49336 464 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 TOP3AQ13472 1001 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 MAPRE2Q15555 327 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 MEA1Q16626 185 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 MFSD14BQ5SR56 506 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 ATAD3BQ5T9A4 648 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 BROXQ5VW32 411 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 TRNT1Q96Q11 434 aaKnown RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 SENP6Q9GZR1 1112 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 POLR3FQ9H1D9 316 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 CHD1O14646 1710 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 SAGE2PA6NJ88 616 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 TRIM13O60858 407 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 PDE9AO76083 593 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 GCP02774 474 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 RPL35P42766 123 aaKnown RBP5.15□□□□□ -1.58
VPS13D-214ENST00000620676 NT5DC1Q5TFE4 455 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 USPL1Q5W0Q7 1092 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 KRT39Q6A163 491 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 TMC7Q7Z402 723 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 IMPAD1Q9NX62 359 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 CCDC167Q9P0B6 97 aa5.15□□□□□ -1.58
VPS13D-214ENST00000620676 XXYLT1Q8NBI6 393 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 DCDC2Q9UHG0 476 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 LDLRP01130 860 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 RECQLP46063 649 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-214ENST00000620676 TGFBIQ15582 683 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 CA9Q16790 459 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 ELMOD2Q8IZ81 293 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 FNDC8Q8TC99 324 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 BTN2A2Q8WVV5 523 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 CLIP3Q96DZ5 547 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 SPON1Q9HCB6 807 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 LRRC4BQ9NT99 713 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 POU2F3Q9UKI9 436 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 ZMYM2Q9UBW7 1377 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 ACSL4O60488 711 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 FBXO21O94952 628 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 MAN2A2P49641 1150 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 GK5Q6ZS86 529 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 ZFAND2BQ8WV99 257 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 GPRASP2Q96D09 838 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 OLFM1Q99784 485 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 HESX1Q9UBX0 185 aa5.15□□□□□ -1.59
VPS13D-214ENST00000620676 PDE8AO60658 829 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms