RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.05□□□□□ -1.12
CBWD1-228ENST00000619157 UBQLN1Q9UMX0 589 aaKnown RBP8.05□□□□□ -1.12
CBWD1-228ENST00000619157 FAM50BQ9Y247 325 aa8.05□□□□□ -1.12
CBWD1-228ENST00000619157 SSX2IPQ9Y2D8 614 aa8.05□□□□□ -1.12
CBWD1-228ENST00000619157 CDY1Q9Y6F8 540 aa8.05□□□□□ -1.12
CBWD1-228ENST00000619157 TSC2P49815 1807 aa8.05□□□□□ -1.12
CBWD1-228ENST00000619157 TCHHQ07283 1943 aa8.05□□□□□ -1.12
CBWD1-228ENST00000619157 TECTAO75443 2155 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 MYO15AQ9UKN7 3530 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 CCDC195A0A1B0GUA6 201 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 SYN3O14994 580 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 EIF3DO15371 548 aaKnown RBP eCLIP8.04□□□□□ -1.12
CBWD1-228ENST00000619157 EXTL3O43909 919 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 ABLIM3O94929 683 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 SEC24AO95486 1093 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 C1RP00736 705 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 SRGAP2BP0DMP2 458 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 ABCD1P33897 745 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 LILRA4P59901 499 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 NTHL1P78549 312 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 ROR1Q01973 937 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 ELAVL2Q12926 359 aaKnown RBP8.04□□□□□ -1.12
CBWD1-228ENST00000619157 ALCAMQ13740 583 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 BECN1Q14457 450 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 BMS1Q14692 1282 aaKnown RBP8.04□□□□□ -1.12
CBWD1-228ENST00000619157 KYAT1Q16773 422 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 PRR31Q5SQ13 230 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 LMBRD2Q68DH5 695 aaPredicted RBP8.04□□□□□ -1.12
CBWD1-228ENST00000619157 SLFN12LQ6IEE8 588 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 C15orf39Q6ZRI6 1047 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 CBWD2Q8IUF1 395 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 NELFCDQ8IXH7 590 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 FSIP1Q8NA03 581 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 ENGASEQ8NFI3 743 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 HDAC7Q8WUI4 952 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 TMEM209Q96SK2 561 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 RTP3Q9BQQ7 232 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 RHOBTB2Q9BYZ6 727 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 ASB7Q9H672 318 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 PDE11AQ9HCR9 933 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 AGPAT3Q9NRZ7 376 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 SIX4Q9UIU6 781 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 FBXL5Q9UKA1 691 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 C2CD2Q9Y426 696 aa8.04□□□□□ -1.12
CBWD1-228ENST00000619157 PVALEFA0A1B0GWK0 134 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 CLIC2O15247 247 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 DCXO43602 365 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 FZD7O75084 574 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 OR4Q2P0C623 313 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 MTHFRP42898 656 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 SYKP43405 635 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 AMPD3Q01432 767 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 POU5F1Q01860 360 aaKnown RBP8.03□□□□□ -1.12
CBWD1-228ENST00000619157 TMEM132DQ14C87 1099 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 POSTNQ15063 836 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 ATAT1Q5SQI0 421 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 CES5AQ6NT32 575 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 KRBA2Q6ZNG9 492 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 ANKS3Q6ZW76 656 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 MIB1Q86YT6 1006 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 CD302Q8IX05 232 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 SYCP3Q8IZU3 236 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 GPD1LQ8N335 351 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 TMEM87AQ8NBN3 555 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 RBBP8NLQ8NC74 664 aaPredicted RBP8.03□□□□□ -1.12
CBWD1-228ENST00000619157 ST13P5Q8NFI4 369 aaPredicted RBP8.03□□□□□ -1.12
CBWD1-228ENST00000619157 BEST2Q8NFU1 509 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 OR5B17Q8NGF7 314 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 OR10T2Q8NGX3 314 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 SLC7A14Q8TBB6 771 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 SENP8Q96LD8 212 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 RIPOR3Q96MK2 946 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 MYADMQ96S97 322 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 LRRC27Q9C0I9 530 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 KCTD10Q9H3F6 313 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 PLEKHA4Q9H4M7 779 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 SLITRK6Q9H5Y7 841 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 TMEM206Q9H813 350 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 WDR6Q9NNW5 1121 aaKnown RBP8.03□□□□□ -1.12
CBWD1-228ENST00000619157 HCFC1R1Q9NWW0 138 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 ZDHHC7Q9NXF8 308 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 DPP3Q9NY33 737 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 RBAKQ9NYW8 714 aaPredicted RBP8.03□□□□□ -1.12
CBWD1-228ENST00000619157 HSPBP1Q9NZL4 362 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 EXOC7Q9UPT5 735 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 DERAQ9Y315 318 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 NUB1Q9Y5A7 615 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 SCN1AP35498 2009 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 NOTCH4Q99466 2003 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 CLUHO75153 1309 aa8.03□□□□□ -1.12
CBWD1-228ENST00000619157 DOCK6Q96HP0 2047 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 CCL16O15467 120 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 HCRTO43612 131 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 TRAPPC3O43617 180 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 ZNF202O95125 648 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 OAZ2O95190 189 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 NUCB2P80303 420 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 CREMQ03060 361 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 CCDC142Q17RM4 750 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 CTXN3Q4LDR2 81 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms