RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 EMC10Q5UCC4 262 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 CAPN12Q6ZSI9 719 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 DENND5BQ6ZUT9 1274 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 TRMT10CQ7L0Y3 403 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 CDKL3Q8IVW4 592 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 ZCCHC9Q8N567 271 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 GIPC2Q8TF65 315 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 FAM107BQ9H098 131 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 SCML2Q9UQR0 700 aa13.13□□□□□ -0.31
TNFAIP3-209ENST00000619035 WDR27A2RRH5 827 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 IRAK2O43187 625 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 TTC4O95801 387 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 YWHAQP27348 245 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 NR2C2P49116 596 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 AUHQ13825 339 aaKnown RBP13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 MORF4L2Q15014 288 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 ANKRD22Q5VYY1 191 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 MON1AQ86VX9 555 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 CMTR2Q8IYT2 770 aaKnown RBP13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 RNF168Q8IYW5 571 aaPredicted RBP13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 FBXO32Q969P5 355 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 TMEM169Q96HH4 297 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 ZNF558Q96NG5 402 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 SELENOSQ9BQE4 189 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 SIK2Q9H0K1 926 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 USP29Q9HBJ7 922 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 COMMD8Q9NX08 183 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 STK39Q9UEW8 545 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 OR12D3Q9UGF7 316 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 MAGED2Q9UNF1 606 aaPredicted RBP13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 NR2E3Q9Y5X4 410 aa13.12□□□□□ -0.31
TNFAIP3-209ENST00000619035 BCLAF3A2AJT9 711 aaKnown RBP13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 ZBBXA8MT70 800 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 NDC80O14777 642 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 MOCS2O96007 188 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 ZNF135P52742 658 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 DPYSQ14117 519 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 SLC45A4Q5BKX6 768 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 PCGF5Q86SE9 256 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 PPIL6Q8IXY8 311 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 CPT1BQ92523 772 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 PRCCQ92733 491 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 YME1L1Q96TA2 773 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 LGMNQ99538 433 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 SMOC2Q9H3U7 446 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 RC3H2Q9HBD1 1191 aaKnown RBP13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 SAYSD1Q9NPB0 183 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 MTRRQ9UBK8 725 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 BACE2Q9Y5Z0 518 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 MRPL42Q9Y6G3 142 aaKnown RBP13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 COL4A6Q14031 1691 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 TCRBV7S3A2A0A539 114 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 CFAP69A5D8W1 941 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 IGLV3-25P01717 112 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 HAPLN1P10915 354 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 CREB1P16220 341 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 ERCC2P18074 760 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 EPHB2P29323 1055 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 FAXCQ5TGI0 409 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 HEATR6Q6AI08 1181 aaKnown RBP13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 CCNYQ8ND76 341 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 CCDC110Q8TBZ0 833 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 TFB1MQ8WVM0 346 aaKnown RBP13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 EPAS1Q99814 870 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 IL23AQ9NPF7 189 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 TBK1Q9UHD2 729 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 SHOC2Q9UQ13 582 aa13.11□□□□□ -0.31
TNFAIP3-209ENST00000619035 ZNF638Q14966 1978 aaKnown RBP13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 IVLP07476 585 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 LAG3P18627 525 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 DNAJB2P25686 324 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 CCR1P32246 355 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 MAGEA4P43358 317 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 AP1B1Q10567 949 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 TAF10Q12962 218 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 SEMA3BQ13214 749 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 C6orf118Q5T5N4 469 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 RWDD4Q6NW29 188 aaKnown RBP13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 UBE2Q1Q7Z7E8 422 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 TP53INP2Q8IXH6 220 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 GPR65Q8IYL9 337 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 ARHGAP18Q8N392 663 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 PGM2Q96G03 612 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 QKIQ96PU8 341 aaKnown RBP eCLIP13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 RAB6BQ9NRW1 208 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 PAK5Q9P286 719 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 HSFX1Q9UBD0 423 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 XPO7Q9UIA9 1087 aaKnown RBP13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 E7EVH7 732 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 DCLK1O15075 740 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 TMEM63AO94886 807 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 LRIG2O94898 1065 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 RTN3O95197 1032 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 ATF6P18850 670 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 RPL10AP62906 217 aaKnown RBP13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 EFEMP1Q12805 493 aa13.1□□□□□ -0.31
TNFAIP3-209ENST00000619035 XRCC4Q13426 336 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms