RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 TTC17Q96AE7 1141 aa14.35□□□□□ -0.11
CBWD1-226ENST00000618061 AGAP3Q96P47 875 aa14.35□□□□□ -0.11
CBWD1-226ENST00000618061 MAGED2Q9UNF1 606 aaPredicted RBP14.35□□□□□ -0.11
CBWD1-226ENST00000618061 GIT1Q9Y2X7 761 aa14.35□□□□□ -0.11
CBWD1-226ENST00000618061 SHROOM3Q8TF72 1996 aa14.35□□□□□ -0.11
CBWD1-226ENST00000618061 A0A0A0MRY4 1105 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.34□□□□□ -0.11
CBWD1-226ENST00000618061 CA12O43570 354 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 EDF1O60869 148 aaKnown RBP14.34□□□□□ -0.11
CBWD1-226ENST00000618061 TOP3BO95985 862 aaKnown RBP14.34□□□□□ -0.11
CBWD1-226ENST00000618061 APOEP02649 317 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 LTFP02788 710 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 F7P08709 466 aaPredicted RBP14.34□□□□□ -0.11
CBWD1-226ENST00000618061 ERCC2P18074 760 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 MAGEA3P43357 314 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 SLC18A1P54219 525 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 SEMA5AQ13591 1074 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 DPYSQ14117 519 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 CD300LGQ6UXG3 332 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 SH2D5Q6ZV89 423 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 OTOAQ7RTW8 1153 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 TBC1D1Q86TI0 1168 aaPredicted RBP14.34□□□□□ -0.11
CBWD1-226ENST00000618061 SLC26A11Q86WA9 606 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 LRRC6Q86X45 466 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 ZNF567Q8N184 647 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 TMEM86AQ8N2M4 240 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 NPWQ8N729 165 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 OR10T2Q8NGX3 314 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 SCAMP5Q8TAC9 235 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 SPATA13Q96N96 652 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 EBNA1BP2Q99848 306 aaKnown RBP14.34□□□□□ -0.11
CBWD1-226ENST00000618061 SLC13A1Q9BZW2 595 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 UPF3AQ9H1J1 476 aaKnown RBP14.34□□□□□ -0.11
CBWD1-226ENST00000618061 CHST12Q9NRB3 414 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 KLHL14Q9P2G3 628 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 CDH9Q9ULB4 789 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 TTC3P53804 2025 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 USP12O75317 370 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 RASSF9O75901 435 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
CBWD1-226ENST00000618061 TSHRP16473 764 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 TPSB2P20231 275 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 WASHC5Q12768 1159 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 SREBF2Q12772 1141 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 PRKD1Q15139 912 aaPredicted RBP14.34□□□□□ -0.11
CBWD1-226ENST00000618061 TPSAB1Q15661 275 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 RAB41Q5JT25 222 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 MROH9Q5TGP6 573 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 CES3Q6UWW8 571 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 KIF2BQ8N4N8 673 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 MCUQ8NE86 351 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 ECT2Q9H8V3 914 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 PNPLA8Q9NP80 782 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 NPHS2Q9NP85 383 aa14.34□□□□□ -0.11
CBWD1-226ENST00000618061 DCLK1O15075 740 aa14.33□□□□□ -0.11
CBWD1-226ENST00000618061 OR4Q2P0C623 313 aa14.33□□□□□ -0.11
CBWD1-226ENST00000618061 PRKCHP24723 683 aa14.33□□□□□ -0.11
CBWD1-226ENST00000618061 MGAT1P26572 445 aa14.33□□□□□ -0.11
CBWD1-226ENST00000618061 PGFP49763 221 aa14.33□□□□□ -0.11
CBWD1-226ENST00000618061 TTC39BQ5VTQ0 682 aaPredicted RBP14.33□□□□□ -0.11
CBWD1-226ENST00000618061 SMARCD1Q96GM5 515 aa14.33□□□□□ -0.11
CBWD1-226ENST00000618061 CNGB3Q9NQW8 809 aa14.33□□□□□ -0.11
CBWD1-226ENST00000618061 NOD1Q9Y239 953 aa14.33□□□□□ -0.11
CBWD1-226ENST00000618061 STARD13Q9Y3M8 1113 aa14.33□□□□□ -0.11
CBWD1-226ENST00000618061 B4GALT3O60512 393 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 SPAG6O75602 509 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 DNAJC8O75937 253 aaPredicted RBP14.33□□□□□ -0.12
CBWD1-226ENST00000618061 TPI1P60174 286 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 NCALDP61601 193 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 KCNJ2P63252 427 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 GALNTL6Q49A17 601 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 PID1Q7Z2X4 250 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 MRPL10Q7Z7H8 261 aaKnown RBP14.33□□□□□ -0.12
CBWD1-226ENST00000618061 PGBD4Q96DM1 585 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 OXNAD1Q96HP4 312 aaPredicted RBP14.33□□□□□ -0.12
CBWD1-226ENST00000618061 APOPT1Q96IL0 206 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 MECRQ9BV79 373 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 TKTL2Q9H0I9 626 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 SSU72Q9NP77 194 aaKnown RBP14.33□□□□□ -0.12
CBWD1-226ENST00000618061 KLC4Q9NSK0 619 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 RNF186Q9NXI6 227 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 DCTN4Q9UJW0 460 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 FBXW11Q9UKB1 542 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 NUDT5Q9UKK9 219 aa14.33□□□□□ -0.12
CBWD1-226ENST00000618061 MKI67P46013 3256 aaKnown RBP14.33□□□□□ -0.12
CBWD1-226ENST00000618061 LAMA2P24043 3122 aaKnown RBP14.32□□□□□ -0.12
CBWD1-226ENST00000618061 HMX2A2RU54 273 aa14.32□□□□□ -0.12
CBWD1-226ENST00000618061 TMEM88BA6NKF7 163 aa14.32□□□□□ -0.12
CBWD1-226ENST00000618061 HACD1B0YJ81 288 aa14.32□□□□□ -0.12
CBWD1-226ENST00000618061 ODC1P11926 461 aa14.32□□□□□ -0.12
CBWD1-226ENST00000618061 BGNP21810 368 aa14.32□□□□□ -0.12
CBWD1-226ENST00000618061 NEK3P51956 506 aa14.32□□□□□ -0.12
CBWD1-226ENST00000618061 PLEKHG4Q58EX7 1191 aa14.32□□□□□ -0.12
CBWD1-226ENST00000618061 CYB5D1Q6P9G0 228 aa14.32□□□□□ -0.12
CBWD1-226ENST00000618061 RFWD2Q8NHY2 731 aa14.32□□□□□ -0.12
CBWD1-226ENST00000618061 GSDMBQ8TAX9 411 aa14.32□□□□□ -0.12
CBWD1-226ENST00000618061 COLEC11Q9BWP8 271 aa14.32□□□□□ -0.12
CBWD1-226ENST00000618061 FRMD8Q9BZ67 464 aaPredicted RBP14.32□□□□□ -0.12
CBWD1-226ENST00000618061 MYLK2Q9H1R3 596 aa14.32□□□□□ -0.12
CBWD1-226ENST00000618061 RXFP1Q9HBX9 757 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms