RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 NAP1L5Q96NT1 182 aaPredicted RBP25.84■■□□□ 1.73
PMS1-220ENST00000618056 ZDHHC4Q9NPG8 344 aa25.84■■□□□ 1.73
PMS1-220ENST00000618056 DDIT4Q9NX09 232 aa25.84■■□□□ 1.73
PMS1-220ENST00000618056 CKAP5Q14008 2032 aa25.83■■□□□ 1.73
PMS1-220ENST00000618056 GOLGA6L7A0A1B0GV03 622 aa25.83■■□□□ 1.73
PMS1-220ENST00000618056 NTSR1P30989 418 aa25.83■■□□□ 1.73
PMS1-220ENST00000618056 GEN1Q17RS7 908 aa25.83■■□□□ 1.73
PMS1-220ENST00000618056 ABCA7Q8IZY2 2146 aa25.83■■□□□ 1.73
PMS1-220ENST00000618056 GAB3Q8WWW8 586 aa25.83■■□□□ 1.73
PMS1-220ENST00000618056 SGSHP51688 502 aa25.82■■□□□ 1.72
PMS1-220ENST00000618056 SRSF5Q13243 272 aaKnown RBP25.82■■□□□ 1.72
PMS1-220ENST00000618056 NR1I3Q14994 352 aa25.82■■□□□ 1.72
PMS1-220ENST00000618056 EIF4HQ15056 248 aaKnown RBP25.82■■□□□ 1.72
PMS1-220ENST00000618056 HJURPQ8NCD3 748 aaPredicted RBP25.82■■□□□ 1.72
PMS1-220ENST00000618056 BAP1Q92560 729 aa25.82■■□□□ 1.72
PMS1-220ENST00000618056 RUBCNQ92622 972 aa25.82■■□□□ 1.72
PMS1-220ENST00000618056 NT5C3BQ969T7 300 aa25.82■■□□□ 1.72
PMS1-220ENST00000618056 POLMQ9NP87 494 aaPredicted RBP25.82■■□□□ 1.72
PMS1-220ENST00000618056 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.82■■□□□ 1.72
PMS1-220ENST00000618056 KCNU1A8MYU2 1149 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 NPC1O15118 1278 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 MOCS2O96007 188 aaPredicted RBP25.81■■□□□ 1.72
PMS1-220ENST00000618056 SERPINC1P01008 464 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 CCDC172P0C7W6 258 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 UNGP13051 313 aaPredicted RBP25.81■■□□□ 1.72
PMS1-220ENST00000618056 MMP8P22894 467 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 CCR1P32246 355 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 SIM2Q14190 667 aaPredicted RBP25.81■■□□□ 1.72
PMS1-220ENST00000618056 MS4A13Q5J8X5 152 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 FAM102AQ5T9C2 384 aaPredicted RBP25.81■■□□□ 1.72
PMS1-220ENST00000618056 ARCQ7LC44 396 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 ATP6V0D2Q8N8Y2 350 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 ZNF557Q8N988 423 aaPredicted RBP25.81■■□□□ 1.72
PMS1-220ENST00000618056 PRICKLE1Q96MT3 831 aaPredicted RBP25.81■■□□□ 1.72
PMS1-220ENST00000618056 NPY6RQ99463 290 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 GABRG3Q99928 467 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 NUCKS1Q9H1E3 243 aaKnown RBP25.81■■□□□ 1.72
PMS1-220ENST00000618056 TMEM51Q9NW97 253 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 XPO7Q9UIA9 1087 aaKnown RBP25.81■■□□□ 1.72
PMS1-220ENST00000618056 STAP1Q9ULZ2 295 aa25.81■■□□□ 1.72
PMS1-220ENST00000618056 SPTBN4Q9H254 2564 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 TBL1XO60907 577 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 RPP40O75818 363 aaKnown RBP25.8■■□□□ 1.72
PMS1-220ENST00000618056 ALDH1A2O94788 518 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 FERP16591 822 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 HLA-FP30511 346 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 CENPCQ03188 943 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 ARID5AQ03989 594 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 MTA1Q13330 715 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 E2F5Q15329 346 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 C2CD6Q53TS8 623 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 CHPFQ8IZ52 775 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.8■■□□□ 1.72
PMS1-220ENST00000618056 PCDHB18PQ96TA0 734 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 ACOX2Q99424 681 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 SLC12A6Q9UHW9 1150 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 RAB23Q9ULC3 237 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 DMXL1Q9Y485 3027 aa25.8■■□□□ 1.72
PMS1-220ENST00000618056 TYW5A2RUC4 315 aaKnown RBP25.79■■□□□ 1.72
PMS1-220ENST00000618056 TIMM44O43615 452 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 HOXB2P14652 356 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 RNASE9P60153 205 aaKnown RBP25.79■■□□□ 1.72
PMS1-220ENST00000618056 OTUD1Q5VV17 481 aaPredicted RBP25.79■■□□□ 1.72
PMS1-220ENST00000618056 SDE2Q6IQ49 451 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 ANO7Q6IWH7 933 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 MMS22LQ6ZRQ5 1243 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 PRR23BQ6ZRT6 265 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 KIAA0907Q7Z7F0 614 aaPredicted RBP25.79■■□□□ 1.72
PMS1-220ENST00000618056 MDGA1Q8NFP4 955 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 WFIKKN2Q8TEU8 576 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 UCMAQ8WVF2 138 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 PGAP3Q96FM1 320 aaPredicted RBP25.79■■□□□ 1.72
PMS1-220ENST00000618056 ELOVL2Q9NXB9 296 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 THAP10Q9P2Z0 257 aaPredicted RBP25.79■■□□□ 1.72
PMS1-220ENST00000618056 TMEM59LQ9UK28 342 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 THADAQ6YHU6 1953 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 M0QYT0 321 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 ABCB4P21439 1286 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 FANCCQ00597 558 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 CLEC16AQ2KHT3 1053 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 LAIR1Q6GTX8 287 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 SLC30A5Q8TAD4 765 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 MYEOVQ96EZ4 313 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 AGPAT1Q99943 283 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 ADAM33Q9BZ11 813 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 CALCOCO1Q9P1Z2 691 aa25.79■■□□□ 1.72
PMS1-220ENST00000618056 SYNJ2BP-COX16A0A087WUM0 186 aa25.78■■□□□ 1.72
PMS1-220ENST00000618056 A0A1W2PQF6 199 aa25.78■■□□□ 1.72
PMS1-220ENST00000618056 GOLGA6L19H0YKK7 550 aa25.78■■□□□ 1.72
PMS1-220ENST00000618056 TACR2P21452 398 aa25.78■■□□□ 1.72
PMS1-220ENST00000618056 FLT3P36888 993 aa25.78■■□□□ 1.72
PMS1-220ENST00000618056 RPS24P62847 133 aaKnown RBP25.78■■□□□ 1.72
PMS1-220ENST00000618056 NME3Q13232 169 aa25.78■■□□□ 1.72
PMS1-220ENST00000618056 ENPP2Q13822 863 aa25.78■■□□□ 1.72
PMS1-220ENST00000618056 SLC25A52Q3SY17 297 aa25.78■■□□□ 1.72
PMS1-220ENST00000618056 RAP1GAP2Q684P5 730 aa25.78■■□□□ 1.72
PMS1-220ENST00000618056 TMEM215Q68D42 235 aa25.78■■□□□ 1.72
PMS1-220ENST00000618056 CEP68Q76N32 757 aa25.78■■□□□ 1.72
PMS1-220ENST00000618056 IRF2BP2Q7Z5L9 587 aa25.78■■□□□ 1.72
PMS1-220ENST00000618056 PHF13Q86YI8 300 aaPredicted RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms