RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 C3orf70A6NLC5 250 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 ADRA1DP25100 572 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 BRCC3P46736 316 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 CLCNKBP51801 687 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 TAP1Q03518 808 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 MROH9Q5TGP6 573 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 SDHAF4Q5VUM1 108 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 KCNT2Q6UVM3 1135 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 TTC7BQ86TV6 843 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 PRPF39Q86UA1 669 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 PPIL6Q8IXY8 311 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 WNT8BQ93098 351 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 PAFAH2Q99487 392 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 RSAD1Q9HA92 442 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 DDX43Q9NXZ2 648 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 MARCOQ9UEW3 520 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 ST3GAL5Q9UNP4 418 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 AP4E1Q9UPM8 1137 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 NRCAMQ92823 1304 aa14.93□□□□□ -0.02
SHROOM1-208ENST00000617339 MYBPHLA2RUH7 354 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 RRN3P2A6NIE6 340 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 GOLGA8TH3BQL2 631 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 ESRRAP11474 423 aaPredicted RBP14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 HDAC4P56524 1084 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 BBS12Q6ZW61 710 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 OSTM1Q86WC4 334 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 CXorf38Q8TB03 319 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 SLC35B2Q8TB61 432 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 CLPTM1LQ96KA5 538 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 RNF157Q96PX1 679 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 CYP3A43Q9HB55 503 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 ACSS2Q9NR19 701 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 CHCHD3Q9NX63 227 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 MOCS2O96007 188 aaPredicted RBP14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 INHBAP08476 426 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 SERPINB3P29508 390 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 ATICP31939 592 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 TAF6P49848 677 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 LILRA4P59901 499 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 EML3Q32P44 896 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 ZNF75CPQ92670 426 aaPredicted RBP14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 USP6NLQ92738 828 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 NMD3Q96D46 503 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 MCRS1Q96EZ8 462 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 SNX27Q96L92 541 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 PCDH18Q9HCL0 1135 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 UBQLN1Q9UMX0 589 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 CDY2AQ9Y6F7 541 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 CCDC160A6NGH7 325 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 GSC2O15499 205 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 TROVE2P10155 538 aaKnown RBP eCLIP14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 NCAM1P13591 858 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 AKR1A1P14550 325 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 STAT4Q14765 748 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 GPR152Q8TDT2 470 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 CELF6Q96J87 481 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 GLT1D1Q96MS3 346 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 TRAPPC9Q96Q05 1148 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 PCDH9Q9HC56 1237 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 KRT82Q9NSB4 513 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 MIOSQ9NXC5 875 aa14.92□□□□□ -0.02
SHROOM1-208ENST00000617339 APOC4-APOC2K7ER74 178 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 CCDC22O60826 627 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 APOC2P02655 101 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 LYNP07948 512 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 CD52P31358 61 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 PGM1P36871 562 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 PGGT1BP53609 377 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 CAV1Q03135 178 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 SYDE1Q6ZW31 735 aaPredicted RBP14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 TRABD2AQ86V40 505 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 LRRC6Q86X45 466 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 SPNS2Q8IVW8 549 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 BTBD10Q9BSF8 475 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 SLC17A7Q9P2U7 560 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 GABRQQ9UN88 632 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 LCTP09848 1927 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 TXNDC9O14530 226 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 MT-ND3P03897 115 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 GSTA2P09210 222 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 OR4Q2P0C623 313 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 TKTL1P51854 596 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 PRKCZQ05513 592 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 FAAP100Q0VG06 881 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 SLC10A2Q12908 348 aaPredicted RBP14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 RWDD4Q6NW29 188 aaKnown RBP14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 ANKRD23Q86SG2 305 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 MPP5Q8N3R9 675 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 SH3TC2Q8TF17 1288 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 ZNF184Q99676 751 aaPredicted RBP14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 SLC15A5A6NIM6 579 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 METTL18O95568 372 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 TFDP2Q14188 446 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 FAM111AQ96PZ2 611 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 IQCGQ9H095 443 aaKnown RBP14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 LRFN2Q9ULH4 789 aa14.91□□□□□ -0.02
SHROOM1-208ENST00000617339 HNRNPRO43390 633 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms