RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 ADSLP30566 484 aaPredicted RBP16.02■□□□□ 0.16
GPN1-212ENST00000616939 MAGEA8P43361 318 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 MAGEA12P43365 314 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 HDAC4P56524 1084 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 MYBPC1Q00872 1141 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 CAPSQ13938 189 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 BAATQ14032 418 aaPredicted RBP16.02■□□□□ 0.16
GPN1-212ENST00000616939 HERC3Q15034 1050 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 TCHHL1Q5QJ38 904 aaPredicted RBP16.02■□□□□ 0.16
GPN1-212ENST00000616939 SCARA5Q6ZMJ2 495 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 TRPC4APQ8TEL6 797 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 LRGUKQ96M69 825 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 MMP19Q99542 508 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 SENP6Q9GZR1 1112 aaPredicted RBP16.02■□□□□ 0.16
GPN1-212ENST00000616939 CDH19Q9H159 772 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 PCDH18Q9HCL0 1135 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 RNF146Q9NTX7 359 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 COPG2Q9UBF2 871 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 ADAM28Q9UKQ2 775 aa16.02■□□□□ 0.16
GPN1-212ENST00000616939 CTDP1Q9Y5B0 961 aaPredicted RBP16.02■□□□□ 0.16
GPN1-212ENST00000616939 LTBP4Q8N2S1 1624 aa16.02■□□□□ 0.15
GPN1-212ENST00000616939 PHIPQ8WWQ0 1821 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 A0A0J9YVX5 310 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 TPP1O14773 563 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 MICAL2O94851 1124 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 HMGCRP04035 888 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 FAM58BPP0C7Q3 252 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 THRAP10827 490 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 CDK4P11802 303 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 PTPN11Q06124 597 aaPredicted RBP16.01■□□□□ 0.15
GPN1-212ENST00000616939 DCTN2Q13561 401 aaKnown RBP16.01■□□□□ 0.15
GPN1-212ENST00000616939 MYLK3Q32MK0 819 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 FAM102AQ5T9C2 384 aaPredicted RBP16.01■□□□□ 0.15
GPN1-212ENST00000616939 C16orf46Q6P387 395 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 RSPH3Q86UC2 560 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 C10orf107Q8IVU9 208 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 CDAN1Q8IWY9 1227 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 NUP93Q8N1F7 819 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 NSUN6Q8TEA1 469 aaKnown RBP16.01■□□□□ 0.15
GPN1-212ENST00000616939 ANKRD36BP1Q96IX9 119 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 QKIQ96PU8 341 aaKnown RBP eCLIP16.01■□□□□ 0.15
GPN1-212ENST00000616939 INO80BQ9C086 356 aaPredicted RBP16.01■□□□□ 0.15
GPN1-212ENST00000616939 VPS33BQ9H267 617 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 FAM124BQ9H5Z6 455 aaPredicted RBP16.01■□□□□ 0.15
GPN1-212ENST00000616939 ZNF302Q9NR11 478 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 EIF2B3Q9NR50 452 aaKnown RBP16.01■□□□□ 0.15
GPN1-212ENST00000616939 PRSS51A0A1B0GVH4 220 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 MDM4O15151 490 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 TOP3BO95985 862 aaKnown RBP16.01■□□□□ 0.15
GPN1-212ENST00000616939 ZFXP17010 805 aaPredicted RBP16.01■□□□□ 0.15
GPN1-212ENST00000616939 KCNA4P22459 653 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 SYCP2LQ5T4T6 812 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 FAM43BQ6ZT52 329 aaPredicted RBP16.01■□□□□ 0.15
GPN1-212ENST00000616939 TRIM74Q86UV6 250 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 TRIM73Q86UV7 250 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 MPP5Q8N3R9 675 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 PHTF2Q8N3S3 785 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 ZFP28Q8NHY6 868 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 PCDH19Q8TAB3 1148 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 GAB3Q8WWW8 586 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 RXFP2Q8WXD0 754 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 PLEKHG4BQ96PX9 1271 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 NAT9Q9BTE0 207 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 MORF4L1Q9UBU8 362 aa16.01■□□□□ 0.15
GPN1-212ENST00000616939 YDJCA8MPS7 323 aa16■□□□□ 0.15
GPN1-212ENST00000616939 ZBTB14O43829 449 aa16■□□□□ 0.15
GPN1-212ENST00000616939 MSCO60682 206 aa16■□□□□ 0.15
GPN1-212ENST00000616939 METTL18O95568 372 aa16■□□□□ 0.15
GPN1-212ENST00000616939 SETSIPP0DME0 302 aa16■□□□□ 0.15
GPN1-212ENST00000616939 VDRP11473 427 aa16■□□□□ 0.15
GPN1-212ENST00000616939 NCF2P19878 526 aaPredicted RBP16■□□□□ 0.15
GPN1-212ENST00000616939 ARRB2P32121 409 aa16■□□□□ 0.15
GPN1-212ENST00000616939 GARSP41250 739 aaKnown RBP16■□□□□ 0.15
GPN1-212ENST00000616939 GPD2P43304 727 aa16■□□□□ 0.15
GPN1-212ENST00000616939 SERPINB8P50452 374 aa16■□□□□ 0.15
GPN1-212ENST00000616939 EMP3P54852 163 aa16■□□□□ 0.15
GPN1-212ENST00000616939 SFSWAPQ12872 951 aaKnown RBP16■□□□□ 0.15
GPN1-212ENST00000616939 RFTN1Q14699 578 aaPredicted RBP16■□□□□ 0.15
GPN1-212ENST00000616939 TARBP2Q15633 366 aaKnown RBP16■□□□□ 0.15
GPN1-212ENST00000616939 SEZ6Q53EL9 994 aa16■□□□□ 0.15
GPN1-212ENST00000616939 ZNF667Q5HYK9 610 aa16■□□□□ 0.15
GPN1-212ENST00000616939 RSBN1LQ6PCB5 846 aaPredicted RBP16■□□□□ 0.15
GPN1-212ENST00000616939 ATG14Q6ZNE5 492 aa16■□□□□ 0.15
GPN1-212ENST00000616939 ZNF410Q86VK4 478 aa16■□□□□ 0.15
GPN1-212ENST00000616939 MTMR14Q8NCE2 650 aa16■□□□□ 0.15
GPN1-212ENST00000616939 GMLQ99445 158 aa16■□□□□ 0.15
GPN1-212ENST00000616939 ACO2Q99798 780 aaKnown RBP16■□□□□ 0.15
GPN1-212ENST00000616939 HAUS8Q9BT25 410 aa16■□□□□ 0.15
GPN1-212ENST00000616939 CYP3A43Q9HB55 503 aa16■□□□□ 0.15
GPN1-212ENST00000616939 TBCCD1Q9NVR7 557 aa16■□□□□ 0.15
GPN1-212ENST00000616939 ZNF510Q9Y2H8 683 aa16■□□□□ 0.15
GPN1-212ENST00000616939 IGKV6D-21A0A0A0MT36 114 aa15.99■□□□□ 0.15
GPN1-212ENST00000616939 STK10O94804 968 aaKnown RBP15.99■□□□□ 0.15
GPN1-212ENST00000616939 SRGAP2CP0DJJ0 459 aa15.99■□□□□ 0.15
GPN1-212ENST00000616939 SRGAP2BP0DMP2 458 aa15.99■□□□□ 0.15
GPN1-212ENST00000616939 PGAM1P18669 254 aa15.99■□□□□ 0.15
GPN1-212ENST00000616939 ICAM3P32942 547 aa15.99■□□□□ 0.15
GPN1-212ENST00000616939 NR2C2P49116 596 aa15.99■□□□□ 0.15
GPN1-212ENST00000616939 MTMR2Q13614 643 aa15.99■□□□□ 0.15
GPN1-212ENST00000616939 ZNF423Q2M1K9 1284 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms