RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 DEPDC1Q5TB30 811 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 NLRX1Q86UT6 975 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 FBXO11Q86XK2 927 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 HERC6Q8IVU3 1022 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 RYBPQ8N488 228 aaPredicted RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 NAT16Q8N8M0 369 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 BANPQ8N9N5 519 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 TMEM35BQ8NCS4 154 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 APPL2Q8NEU8 664 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 TBATAQ96M53 351 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 TNRQ92752 1358 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 ALKQ9UM73 1620 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 MYPNQ86TC9 1320 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 FARP2O94887 1054 aaPredicted RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 XRCC1P18887 633 aaPredicted RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 ENDOUP21128 410 aaKnown RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 HOXD13P35453 343 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 DMP1Q13316 513 aaPredicted RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 TFDP3Q5H9I0 405 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 FAM47CQ5HY64 1035 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 AARS2Q5JTZ9 985 aaKnown RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 SPOCD1Q6ZMY3 1216 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 CHST15Q7LFX5 561 aaPredicted RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 DSELQ8IZU8 1212 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 FEZF2Q8TBJ5 459 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 NCLNQ969V3 563 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 MAGED4Q96JG8 741 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 SERAC1Q96JX3 654 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 FAM213AQ9BRX8 229 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 SIAEQ9HAT2 523 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 CYP26B1Q9NR63 512 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 NXF1Q9UBU9 619 aaKnown RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 BTBD3Q9Y2F9 522 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 ARAP3Q8WWN8 1544 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 hCG_1984214I3L0E3 225 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 PRKD1Q15139 912 aaPredicted RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 FUT11Q495W5 492 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 ADGRA1Q86SQ6 560 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 SLC22A16Q86VW1 577 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 EPS8L1Q8TE68 723 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 WDR55Q9H6Y2 383 aaPredicted RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 STK32BQ9NY57 414 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 POU2F3Q9UKI9 436 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 PNMA8BQ9ULN7 279 aaPredicted RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 TCRBV9S1A1TA0A576 114 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 BTBD19C9JJ37 291 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 MTSS1O43312 755 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 CCT3P49368 545 aaKnown RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 PRKAA2P54646 552 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 ECT2LQ008S8 904 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 ARL13BQ3SXY8 428 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 BROXQ5VW32 411 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 SNRNP48Q6IEG0 339 aaKnown RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 SLC15A4Q8N697 577 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 Q8N9G6 341 aaPredicted RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 S100ZQ8WXG8 99 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 NPAS2Q99743 824 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 ZNF577Q9BSK1 485 aa13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 EXOSC4Q9NPD3 245 aaKnown RBP13.89□□□□□ -0.19
PPP4R3B-205ENST00000616288 A0A088AWK7 358 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 KRT6AP02538 564 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 KRT6BP04259 564 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 CCNIQ14094 377 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 FGD3Q5JSP0 725 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 CLEC10AQ8IUN9 316 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 ZC3H7AQ8IWR0 971 aaKnown RBP13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 CBR4Q8N4T8 237 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 PCYOX1LQ8NBM8 494 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 ORAI2Q96SN7 254 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 KCTD10Q9H3F6 313 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 ACSS2Q9NR19 701 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 N6AMT1Q9Y5N5 214 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 RGSL1A5PLK6 1076 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 FUCA1P04066 466 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 ATP5BP06576 529 aaKnown RBP13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 KRR1Q13601 381 aaKnown RBP13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 IMPG1Q17R60 797 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 SMUG1Q53HV7 270 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 UBE2UQ5VVX9 321 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 SLC9A4Q6AI14 798 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 KBTBD7Q8WVZ9 684 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 FIG4Q92562 907 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 RORBQ92753 470 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 ASPSCR1Q9BZE9 553 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 PIH1D1Q9NWS0 290 aaKnown RBP13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 E7ENX8 843 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 LIASO43766 372 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 AVILO75366 819 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 WBP4O75554 376 aaKnown RBP13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 PIK3R1P27986 724 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 THOP1P52888 689 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 CASP7P55210 303 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 SNX16P57768 344 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 PADI6Q6TGC4 694 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 FRMD7Q6ZUT3 714 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 FAM163AQ96GL9 167 aaPredicted RBP13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 C7orf26Q96N11 449 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 COQ3Q9NZJ6 369 aa13.88□□□□□ -0.19
PPP4R3B-205ENST00000616288 AURKAO14965 403 aa13.87□□□□□ -0.19
PPP4R3B-205ENST00000616288 TMCC2O75069 709 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms