RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PEBP4Q96S96 227 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 TRPV6Q9H1D0 765 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 COG4Q9H9E3 785 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 C20orf96Q9NUD7 363 aaPredicted RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 BARX2Q9UMQ3 279 aaPredicted RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 C3orf70A6NLC5 250 aaPredicted RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 TPST1O60507 370 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 METTL18O95568 372 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 RALBP11234 206 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 P4HA1P13674 534 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 SLC5A2P31639 672 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 ARRB2P32121 409 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 MYBPC1Q00872 1141 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 DCTN2Q13561 401 aaKnown RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 DLG2Q15700 870 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 TMEM214Q6NUQ4 689 aaKnown RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 CAND1Q86VP6 1230 aaKnown RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 PCDH20Q8N6Y1 951 aaKnown RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 POPDC2Q9HBU9 364 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 FAM49BQ9NUQ9 324 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 TMX2Q9Y320 296 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 COL5A3P25940 1745 aaPredicted RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 HMX2A2RU54 273 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 E7ESA3 106 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 ERBB2P04626 1255 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 EDN1P05305 212 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 FAM58BPP0C7Q3 252 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 TBXAS1P24557 533 aaPredicted RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 POLR2BP30876 1174 aaKnown RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 RXRGP48443 463 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 AAGABQ6PD74 315 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 LPCAT2Q7L5N7 544 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 NCSTNQ92542 709 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 RCN3Q96D15 328 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 FBXL18Q96ME1 805 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 HEXIM2Q96MH2 286 aaKnown RBP13.54□□□□□ -0.24
MSH6-214ENST00000616033 WRNIP1Q96S55 665 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 NUF2Q9BZD4 464 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 PTTG2Q9NZH5 202 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 EFR3BQ9Y2G0 817 aa13.54□□□□□ -0.24
MSH6-214ENST00000616033 SLC15A5A6NIM6 579 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 TMX2-CTNND1H3BSU7 103 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 NAT1P18440 290 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 SERPINB8P50452 374 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 WASHC5Q12768 1159 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 ART3Q13508 389 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 PGM5Q15124 567 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 FAM219BQ5XKK7 198 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 KCTD17Q8N5Z5 321 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 ZBTB8BQ8NAP8 495 aaPredicted RBP13.53□□□□□ -0.24
MSH6-214ENST00000616033 MAPK15Q8TD08 544 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 PKP2Q99959 881 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 RNF19AQ9NV58 838 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 TUBGCP4Q9UGJ1 667 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 HMGXB4Q9UGU5 601 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 ZC3H11AO75152 810 aaKnown RBP eCLIP13.53□□□□□ -0.24
MSH6-214ENST00000616033 PDGFRBP09619 1106 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 GARTP22102 1010 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 TCF7P36402 384 aaPredicted RBP13.53□□□□□ -0.24
MSH6-214ENST00000616033 NAA20P61599 178 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 KLHL35Q6PF15 583 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 KYAT3Q6YP21 454 aaKnown RBP13.53□□□□□ -0.24
MSH6-214ENST00000616033 CYP26B1Q9NR63 512 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 MRGBPQ9NV56 204 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 SH3GLB1Q9Y371 365 aa13.53□□□□□ -0.24
MSH6-214ENST00000616033 MRPL42Q9Y6G3 142 aaKnown RBP13.53□□□□□ -0.24
MSH6-214ENST00000616033 SF3B1O75533 1304 aaKnown RBP eCLIP13.53□□□□□ -0.245e-8■■■■■ 37.4
MSH6-214ENST00000616033 PTPN1P18031 435 aaKnown RBP13.52□□□□□ -0.24
MSH6-214ENST00000616033 AOC1P19801 751 aa13.52□□□□□ -0.24
MSH6-214ENST00000616033 TUFMP49411 452 aaKnown RBP13.52□□□□□ -0.24
MSH6-214ENST00000616033 ENTPD1P49961 510 aa13.52□□□□□ -0.24
MSH6-214ENST00000616033 ATXN1P54253 815 aaKnown RBP13.52□□□□□ -0.24
MSH6-214ENST00000616033 CA9Q16790 459 aa13.52□□□□□ -0.24
MSH6-214ENST00000616033 ANKDD1AQ495B1 522 aa13.52□□□□□ -0.24
MSH6-214ENST00000616033 TMEM259Q4ZIN3 620 aa13.52□□□□□ -0.24
MSH6-214ENST00000616033 TMEM53Q6P2H8 277 aa13.52□□□□□ -0.24
MSH6-214ENST00000616033 RXFP2Q8WXD0 754 aa13.52□□□□□ -0.24
MSH6-214ENST00000616033 KCNK16Q96T55 309 aa13.52□□□□□ -0.24
MSH6-214ENST00000616033 NPAS2Q99743 824 aa13.52□□□□□ -0.24
MSH6-214ENST00000616033 SNX13Q9Y5W8 968 aa13.52□□□□□ -0.24
MSH6-214ENST00000616033 ARHGAP10A1A4S6 786 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 H3BNX3 289 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 CHRNGP07510 517 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 FGF3P11487 239 aaPredicted RBP13.52□□□□□ -0.25
MSH6-214ENST00000616033 KLF10Q13118 480 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 EMC2Q15006 297 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 CCDC142Q17RM4 750 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 ZNF554Q86TJ5 538 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 LRRC43Q8N309 656 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 SPATA6LQ8N4H0 392 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 C17orf50Q8WW18 174 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 SGF29Q96ES7 293 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 PCDHAC1Q9H158 963 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 SBF2Q86WG5 1849 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 ARSAP15289 507 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 MS4A2Q01362 244 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 ATP1A4Q13733 1029 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 KCNJ11Q14654 390 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 CCNYQ8ND76 341 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms