RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 CDKL3Q8IVW4 592 aaPredicted RBP11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MFN1Q8IWA4 741 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GALNT15Q8N3T1 639 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PCDH19Q8TAB3 1148 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZNF75CPQ92670 426 aaPredicted RBP11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 OLFM3Q96PB7 478 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 HNRNPABQ99729 332 aaKnown RBP11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SNTG2Q9NY99 539 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 LMCD1Q9NZU5 365 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 HESX1Q9UBX0 185 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZNF711Q9Y462 761 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 IKBKGQ9Y6K9 419 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GABRDO14764 452 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ADCY6O43306 1168 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CREB3O43889 395 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 EDF1O60869 148 aaKnown RBP11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TGDSO95455 350 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FBXO47Q5MNV8 452 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 STXBP5Q5T5C0 1151 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 C4orf50Q6ZRC1 276 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 C3orf62Q6ZUJ4 267 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 DPP9Q86TI2 863 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SCML4Q8N228 414 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TEX9Q8N6V9 391 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FBXO36Q8NEA4 188 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TCP10LQ8TDR4 215 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SLC9A7Q96T83 725 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MTMR10Q9NXD2 777 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KPNA6O60684 536 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZMPSTE24O75844 475 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MYL2P10916 166 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PTPN4P29074 926 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SV2CQ496J9 727 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 EFHC1Q5JVL4 640 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZCCHC23Q6ZST2 131 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SPATA24Q86W54 205 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FAM71DQ8N9W8 422 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PPP1R14CQ8TAE6 165 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZNF333Q96JL9 665 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 QKIQ96PU8 341 aaKnown RBP eCLIP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KATNAL1Q9BW62 490 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PATJQ8NI35 1801 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 C9IYK1 514 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PSMG1O95456 288 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NELFEP18615 380 aaKnown RBP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZNF135P52742 658 aaPredicted RBP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GJA9P57773 515 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MAP2K5Q13163 448 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MFSD10Q14728 455 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TIFABQ6ZNK6 161 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CLNKQ7Z7G1 428 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RASSF3Q86WH2 238 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FAM172AQ8WUF8 416 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 HSPH1Q92598 858 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SNRNP25Q9BV90 132 aaKnown RBP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TMEM120AQ9BXJ8 343 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 EIF2AQ9BY44 585 aaKnown RBP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 LRMDAQ9H2I8 198 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NRDE2Q9H7Z3 1164 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SH3BP1Q9Y3L3 701 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 IQANK1A0A1B0GTG1 560 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SMIM28A0A1B0GU29 152 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TCRBV7S3A2A0A539 114 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KPNA7A9QM74 516 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SORBS2O94875 1100 aaKnown RBP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CPT1AP50416 773 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 YWHAGP61981 247 aaKnown RBP eCLIP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 BASP1P80723 227 aaKnown RBP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SEMA5AQ13591 1074 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SLC45A4Q5BKX6 768 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SH3PXD2AQ5TCZ1 1133 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FAM91A1Q658Y4 838 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 STEAP4Q687X5 459 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 DARS2Q6PI48 645 aaKnown RBP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PALM2Q8IXS6 379 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.19□□□□□ -0.627e-7■■■■■ 43.5
SENP3-EIF4A1-201ENST00000614237 ZNF513Q8N8E2 541 aaPredicted RBP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RAB3IL1Q8TBN0 382 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PTPRN2Q92932 1015 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MTBPQ96DY7 904 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PGAP3Q96FM1 320 aaPredicted RBP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PIWIL1Q96J94 861 aaKnown RBP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SLC2A13Q96QE2 648 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PAFAH2Q99487 392 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PTPN18Q99952 460 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GALNT8Q9NY28 637 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PCSK1NQ9UHG2 260 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 LRRC42Q9Y546 428 aa11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FNDC1Q4ZHG4 1894 aaPredicted RBP11.19□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PIK3R2O00459 728 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TRAFD1O14545 582 aaPredicted RBP11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 DAB1O75553 588 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ALDH1A2O94788 518 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ETV4P43268 484 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 HCAR3P49019 387 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 USP46P62068 366 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SNX17Q15036 470 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TBC1D25Q3MII6 688 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CATSPER4Q7RTX7 472 aa11.18□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 C12orf29Q8N999 325 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms