RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 FIGNQ5HY92 759 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 EOGTQ5NDL2 527 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 EGFLAMQ63HQ2 1017 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 E4F1Q66K89 784 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 RNF43Q68DV7 783 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 ASCL5Q7RTU5 278 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 WDR5BQ86VZ2 330 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 CHSY1Q86X52 802 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 CAMKK1Q8N5S9 505 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 HJURPQ8NCD3 748 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 TSTD1Q8NFU3 115 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 OLIG1Q8TAK6 271 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 TMA16Q96EY4 203 aaKnown RBP18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 BTN2A3PQ96KV6 586 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 NPY6RQ99463 290 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 SLC2A11Q9BYW1 496 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 ADAM33Q9BZ11 813 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 METTL5Q9NRN9 209 aaKnown RBP18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 IFNKQ9P0W0 207 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 CALCOCO1Q9P1Z2 691 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 EML5Q05BV3 1969 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 MUC22E2RYF6 1773 aaPredicted RBP18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 TYW5A2RUC4 315 aaKnown RBP18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 KCNU1A8MYU2 1149 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 M0QYT0 321 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 GFRA3O60609 400 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 TBL1XO60907 577 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 ADAM23O75077 832 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 SLC2A3P11169 496 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 GSCP56915 257 aaPredicted RBP18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 PTP4A2Q12974 167 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 NME3Q13232 169 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 CRY1Q16526 586 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 MS4A13Q5J8X5 152 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 MPP7Q5T2T1 576 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 RAP1GAP2Q684P5 730 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 TRNP1Q6NT89 227 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 IRF2BP2Q7Z5L9 587 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 PHF13Q86YI8 300 aaPredicted RBP18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 ATP6V0D2Q8N8Y2 350 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 MYEOVQ96EZ4 313 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 SYT11Q9BT88 431 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 EDEM3Q9BZQ6 932 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 EPC1Q9H2F5 836 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 TMEM59LQ9UK28 342 aa18.74■□□□□ 0.59
SEMA3B-211ENST00000612509 CCDC163A0A0D9SF12 145 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 LMNAP02545 664 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 HNRNPLP14866 589 aaKnown RBP eCLIP18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 TFE3P19532 575 aaPredicted RBP18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 ABCB4P21439 1286 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 TACR2P21452 398 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 HLA-FP30511 346 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 RPS24P62847 133 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 SFMBT2Q5VUG0 894 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 TMEM92Q6UXU6 159 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 MON1BQ7L1V2 547 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 ARCQ7LC44 396 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 WFDC5Q8TCV5 224 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 RNF34Q969K3 372 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 NT5C3BQ969T7 300 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 PGAP3Q96FM1 320 aaPredicted RBP18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 TBCBQ99426 244 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 NUP58Q9BVL2 599 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 PIGVQ9NUD9 493 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 ADAM22Q9P0K1 906 aa18.73■□□□□ 0.59
SEMA3B-211ENST00000612509 F5H5T6 163 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 CALB1P05937 261 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 PRKCIP41743 596 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 DGKEP52429 567 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 SRSF5Q13243 272 aaKnown RBP18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 EIF4HQ15056 248 aaKnown RBP18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 SLC25A52Q3SY17 297 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 PHLDB2Q86SQ0 1253 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 MFN1Q8IWA4 741 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 CHPFQ8IZ52 775 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 LGI2Q8N0V4 545 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 EMC1Q8N766 993 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 WFIKKN2Q8TEU8 576 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 ACOX2Q99424 681 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 PRMT1Q99873 361 aaKnown RBP18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 AIPL1Q9NZN9 384 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 STIM2Q9P246 746 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 EBF1Q9UH73 591 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 SLC12A6Q9UHW9 1150 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 SMG5Q9UPR3 1016 aaKnown RBP18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 VPS13AQ96RL7 3174 aa18.72■□□□□ 0.59
SEMA3B-211ENST00000612509 A0A1W2PQJ5 194 aa18.71■□□□□ 0.59
SEMA3B-211ENST00000612509 AXIN1O15169 862 aa18.71■□□□□ 0.59
SEMA3B-211ENST00000612509 HOXB2P14652 356 aa18.71■□□□□ 0.59
SEMA3B-211ENST00000612509 NTSR1P30989 418 aa18.71■□□□□ 0.59
SEMA3B-211ENST00000612509 CNR2P34972 360 aa18.71■□□□□ 0.59
SEMA3B-211ENST00000612509 DEUP1Q05D60 604 aa18.71■□□□□ 0.59
SEMA3B-211ENST00000612509 C1QBPQ07021 282 aaKnown RBP18.71■□□□□ 0.59
SEMA3B-211ENST00000612509 MTA1Q13330 715 aa18.71■□□□□ 0.59
SEMA3B-211ENST00000612509 ANO7Q6IWH7 933 aa18.71■□□□□ 0.59
SEMA3B-211ENST00000612509 BNIPLQ7Z465 357 aa18.71■□□□□ 0.59
SEMA3B-211ENST00000612509 RASSF3Q86WH2 238 aa18.71■□□□□ 0.59
SEMA3B-211ENST00000612509 ZNF557Q8N988 423 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms