RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PTCD3Q96EY7 689 aaKnown RBP15.17■□□□□ 0.02
CDH1-213ENST00000612417 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.17■□□□□ 0.02
CDH1-213ENST00000612417 HEY2Q9UBP5 337 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 SH3BP1Q9Y3L3 701 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 FRMPD3Q5JV73 1810 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 A0A0G2JND7 137 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 TTC36A6NLP5 189 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 CCDC22O60826 627 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 GABBR2O75899 941 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 RPSAP08865 295 aaKnown RBP15.16■□□□□ 0.02
CDH1-213ENST00000612417 CKBP12277 381 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 GNAZP19086 355 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 BGNP21810 368 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 CYP2F1P24903 491 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 SOWAHAQ2M3V2 549 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 SV2CQ496J9 727 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 FAM26DQ5JW98 314 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 ANKRD20A2Q5SQ80 823 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 SYCP2LQ5T4T6 812 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 ANKRD20A1Q5TYW2 823 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 ANKRD20A3Q5VUR7 823 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 ZNF534Q76KX8 674 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 TRIM42Q8IWZ5 723 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDH1-213ENST00000612417 TTC17Q96AE7 1141 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 ZNF570Q96NI8 536 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 ADAM2Q99965 735 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 IQCGQ9H095 443 aaKnown RBP15.16■□□□□ 0.02
CDH1-213ENST00000612417 ALG13Q9NP73 1137 aaKnown RBP15.16■□□□□ 0.02
CDH1-213ENST00000612417 SLC38A7Q9NVC3 462 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 HESX1Q9UBX0 185 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 PLLPQ9Y342 182 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 NME7Q9Y5B8 376 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 ARL5CA6NH57 179 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 A8MXQ7 604 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 CXorf49A8MYA2 514 aaPredicted RBP15.16■□□□□ 0.02
CDH1-213ENST00000612417 SPTLC1O15269 473 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 MGEA5O60502 916 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 HUS1O60921 280 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 RFPL1O75677 317 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 THP07101 528 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 GM2AP17900 193 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 L1CAMP32004 1257 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 RPL34P49207 117 aaKnown RBP15.16■□□□□ 0.02
CDH1-213ENST00000612417 KRT72Q14CN4 511 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 CDHR3Q6ZTQ4 885 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 SLC26A9Q7LBE3 791 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 SCUBE3Q8IX30 993 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 CTAGE3PQ8IX95 158 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 VPS52Q8N1B4 723 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 APPL2Q8NEU8 664 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 GSDMBQ8TAX9 411 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 CCDC110Q8TBZ0 833 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 SIGLEC10Q96LC7 697 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 C7orf26Q96N11 449 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 QKIQ96PU8 341 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDH1-213ENST00000612417 PPP1R10Q96QC0 940 aaKnown RBP15.16■□□□□ 0.02
CDH1-213ENST00000612417 TMEM120AQ9BXJ8 343 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 UNC93B1Q9H1C4 597 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 SNX25Q9H3E2 840 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 BATF3Q9NR55 127 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 SUFUQ9UMX1 484 aa15.16■□□□□ 0.02
CDH1-213ENST00000612417 FAM159BA6NKW6 160 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 KRT38O76015 456 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 PDGFRBP09619 1106 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 TPBGLP0DKB5 382 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 GNL1P36915 607 aaPredicted RBP15.15■□□□□ 0.02
CDH1-213ENST00000612417 RAB27AP51159 221 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 CLNS1AP54105 237 aaKnown RBP15.15■□□□□ 0.02
CDH1-213ENST00000612417 LILRA4P59901 499 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 MRPS5P82675 430 aaKnown RBP15.15■□□□□ 0.02
CDH1-213ENST00000612417 CRYMQ14894 314 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 FAXCQ5TGI0 409 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 UNC5AQ6ZN44 842 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 CYS1Q717R9 158 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 RAB3IL1Q8TBN0 382 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 MIPEPQ99797 713 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 EBNA1BP2Q99848 306 aaKnown RBP15.15■□□□□ 0.02
CDH1-213ENST00000612417 XAB2Q9HCS7 855 aaKnown RBP15.15■□□□□ 0.02
CDH1-213ENST00000612417 SMYD2Q9NRG4 433 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 FAM49BQ9NUQ9 324 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 SIRPGQ9P1W8 387 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 NKX1-2Q9UD57 310 aaPredicted RBP15.15■□□□□ 0.02
CDH1-213ENST00000612417 GIT1Q9Y2X7 761 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 ARVCFO00192 962 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 PPP1R12AO14974 1030 aaPredicted RBP15.15■□□□□ 0.02
CDH1-213ENST00000612417 CAPN15O75808 1086 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 SERPINB3P29508 390 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 AFF1P51825 1210 aaKnown RBP15.15■□□□□ 0.02
CDH1-213ENST00000612417 CDK18Q07002 472 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 SEMA5AQ13591 1074 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 PPP6R3Q5H9R7 873 aaPredicted RBP15.15■□□□□ 0.02
CDH1-213ENST00000612417 AGMOQ6ZNB7 445 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 NSL1Q96IY1 281 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 BTBD10Q9BSF8 475 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 TSPYL2Q9H2G4 693 aaPredicted RBP15.15■□□□□ 0.02
CDH1-213ENST00000612417 MTMR10Q9NXD2 777 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 GDAP2Q9NXN4 497 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 CACNG4Q9UBN1 327 aa15.15■□□□□ 0.02
CDH1-213ENST00000612417 METTL18O95568 372 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms