RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 LRRC36Q1X8D7 754 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 GRAMD1BQ3KR37 738 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 CCDC14Q49A88 953 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 RARS2Q5T160 578 aaKnown RBP23■■□□□ 1.27
SHANK2-220ENST00000608988 ARMC3Q5W041 872 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 TRNP1Q6NT89 227 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 LCLAT1Q6UWP7 414 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 C16orf89Q6UX73 402 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 FAM183BPQ6ZVS7 135 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 TMC7Q7Z402 723 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 SATL1Q86VE3 508 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 MPP5Q8N3R9 675 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 DNERQ8NFT8 737 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 SREK1Q8WXA9 508 aaKnown RBP23■■□□□ 1.27
SHANK2-220ENST00000608988 LENG1Q96BZ8 264 aaPredicted RBP23■■□□□ 1.27
SHANK2-220ENST00000608988 ZNF696Q9H7X3 374 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 PNPOQ9NVS9 261 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 SIX4Q9UIU6 781 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 PADI4Q9UM07 663 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 GMEB1Q9Y692 573 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 HACD1B0YJ81 288 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 LAMTOR4Q0VGL1 99 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 C15orf59Q2T9L4 293 aaPredicted RBP23■■□□□ 1.27
SHANK2-220ENST00000608988 SH3PXD2AQ5TCZ1 1133 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 C16orf46Q6P387 395 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 EPGNQ6UW88 154 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 DDI1Q8WTU0 396 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 ISL2Q96A47 359 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 DCUN1D1Q96GG9 259 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 TEX13BQ9BXU2 312 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 RPF1Q9H9Y2 349 aaKnown RBP23■■□□□ 1.27
SHANK2-220ENST00000608988 INPP5FQ9Y2H2 1132 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 LOC285556D6RIA3 1793 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 ANK1P16157 1881 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 GPR25O00155 361 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 ACKR2O00590 384 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 TXNDC9O14530 226 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 TNFAIP8O95379 198 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 KRT19P08727 400 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 THRAP10827 490 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 PGAM1P18669 254 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 KCNA4P22459 653 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 CHRNA5P30532 468 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 SNX16P57768 344 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 CREB5Q02930 508 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 KLF10Q13118 480 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 DGKZQ13574 1117 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 TNFAIP1Q13829 316 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 USP41Q3LFD5 358 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.99■■□□□ 1.27
SHANK2-220ENST00000608988 LRRC8BQ6P9F7 803 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 FBXL19Q6PCT2 694 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 BORAQ6PGQ7 559 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 FRMD7Q6ZUT3 714 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 SETD3Q86TU7 594 aaPredicted RBP22.99■■□□□ 1.27
SHANK2-220ENST00000608988 HPS6Q86YV9 775 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 C10orf107Q8IVU9 208 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 ADCY4Q8NFM4 1077 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 SHKBP1Q8TBC3 707 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 WNK4Q96J92 1243 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 MAML3Q96JK9 1138 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 C12orf42Q96LP6 360 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 TWNKQ96RR1 684 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 SNRNP25Q9BV90 132 aaKnown RBP22.99■■□□□ 1.27
SHANK2-220ENST00000608988 ZCWPW1Q9H0M4 648 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 AS3MTQ9HBK9 375 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 THEGQ9P2T0 379 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 COL11A1P12107 1806 aaPredicted RBP22.99■■□□□ 1.27
SHANK2-220ENST00000608988 RLFQ13129 1914 aa22.99■■□□□ 1.27
SHANK2-220ENST00000608988 A6NJR5 290 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 CLPTM1O96005 669 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 SETSIPP0DME0 302 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 NCF2P19878 526 aaPredicted RBP22.98■■□□□ 1.27
SHANK2-220ENST00000608988 CDH8P55286 799 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 INCA1Q0VD86 236 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 ATF7IP2Q5U623 682 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 CCDC124Q96CT7 223 aaKnown RBP22.98■■□□□ 1.27
SHANK2-220ENST00000608988 CNDP1Q96KN2 507 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 PCYT2Q99447 389 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 MMP19Q99542 508 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 CDH19Q9H159 772 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 CYP4F11Q9HBI6 524 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 GTF2IRD1Q9UHL9 959 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 ITGA2BP08514 1039 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 ETS2P15036 469 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 CYP2F1P24903 491 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 ADSLP30566 484 aaPredicted RBP22.98■■□□□ 1.27
SHANK2-220ENST00000608988 SDC4P31431 198 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 STAT5BP51692 787 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 BACE1P56817 501 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 DLG3Q92796 817 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 MPP4Q96JB8 637 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 HEXIM2Q96MH2 286 aaKnown RBP22.98■■□□□ 1.27
SHANK2-220ENST00000608988 TEPSINQ96N21 525 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 DMTF1Q9Y222 760 aa22.98■■□□□ 1.27
SHANK2-220ENST00000608988 ARHGAP10A1A4S6 786 aa22.97■■□□□ 1.27
SHANK2-220ENST00000608988 ZNF189O75820 626 aaPredicted RBP22.97■■□□□ 1.27
SHANK2-220ENST00000608988 STK10O94804 968 aaKnown RBP22.97■■□□□ 1.27
SHANK2-220ENST00000608988 PRKCGP05129 697 aa22.97■■□□□ 1.27
SHANK2-220ENST00000608988 CPA3P15088 417 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms