RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 CEP68Q76N32 757 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 XYLT1Q86Y38 959 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 CCDC117Q8IWD4 279 aaPredicted RBP17.19■□□□□ 0.34
LINC00240-203ENST00000606878 ZNF557Q8N988 423 aaPredicted RBP17.19■□□□□ 0.34
LINC00240-203ENST00000606878 RUBCNQ92622 972 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 BTN2A3PQ96KV6 586 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 ZDHHC4Q9NPG8 344 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 MYO6Q9UM54 1294 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 SYNJ2BP-COX16A0A087WUM0 186 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 KCNU1A8MYU2 1149 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 M0QYT0 321 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 NPC1O15118 1278 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 ADAM23O75077 832 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 DAB1O75553 588 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 F9P00740 461 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 HNRNPLP14866 589 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC00240-203ENST00000606878 HOXD9P28356 352 aaPredicted RBP17.18■□□□□ 0.34
LINC00240-203ENST00000606878 SLC6A4P31645 630 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 PITX1P78337 314 aaPredicted RBP17.18■□□□□ 0.34
LINC00240-203ENST00000606878 NME3Q13232 169 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 GEN1Q17RS7 908 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 USP39Q53GS9 565 aaKnown RBP17.18■□□□□ 0.34
LINC00240-203ENST00000606878 MS4A13Q5J8X5 152 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 FAM102AQ5T9C2 384 aaPredicted RBP17.18■□□□□ 0.34
LINC00240-203ENST00000606878 EGFLAMQ63HQ2 1017 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 NADSYN1Q6IA69 706 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 PRR23BQ6ZRT6 265 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 ANKS1BQ7Z6G8 1248 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 HJURPQ8NCD3 748 aaPredicted RBP17.18■□□□□ 0.34
LINC00240-203ENST00000606878 GAB3Q8WWW8 586 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 AGPAT1Q99943 283 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 HINFPQ9BQA5 517 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 ELOVL2Q9NXB9 296 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 COX16Q9P0S2 106 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 STIM2Q9P246 746 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 HCN2Q9UL51 889 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 STAP1Q9ULZ2 295 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 SMG5Q9UPR3 1016 aaKnown RBP17.18■□□□□ 0.34
LINC00240-203ENST00000606878 SDK1Q7Z5N4 2213 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 GVINP1Q7Z2Y8 2422 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 OTOGLQ3ZCN5 2332 aa17.18■□□□□ 0.34
LINC00240-203ENST00000606878 FAM170AA1A519 330 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 GOLGA8SH3BPF8 625 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 RPP40O75818 363 aaKnown RBP17.17■□□□□ 0.34
LINC00240-203ENST00000606878 MMP8P22894 467 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 WASP42768 502 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 UBASH3AP57075 661 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 FANCCQ00597 558 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 SRSF5Q13243 272 aaKnown RBP17.17■□□□□ 0.34
LINC00240-203ENST00000606878 EIF4HQ15056 248 aaKnown RBP17.17■□□□□ 0.34
LINC00240-203ENST00000606878 C2CD6Q53TS8 623 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 ANO7Q6IWH7 933 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 SND1Q7KZF4 910 aaKnown RBP eCLIP17.17■□□□□ 0.34
LINC00240-203ENST00000606878 SLC30A5Q8TAD4 765 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 PCDHB18PQ96TA0 734 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 ACOX2Q99424 681 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 NPY6RQ99463 290 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 EDEM3Q9BZQ6 932 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 SEPT11Q9NVA2 429 aaKnown RBP17.17■□□□□ 0.34
LINC00240-203ENST00000606878 NCDNQ9UBB6 729 aa17.17■□□□□ 0.34
LINC00240-203ENST00000606878 UNGP13051 313 aaPredicted RBP17.16■□□□□ 0.34
LINC00240-203ENST00000606878 HOXB2P14652 356 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 TACR2P21452 398 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 TNFAIP3P21580 790 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 NSFP46459 744 aaKnown RBP17.16■□□□□ 0.34
LINC00240-203ENST00000606878 LPAL2Q16609 132 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 SLC25A52Q3SY17 297 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 MMS22LQ6ZRQ5 1243 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 ARCQ7LC44 396 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 IRF2BP2Q7Z5L9 587 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 RASSF3Q86WH2 238 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 CHSY1Q86X52 802 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 LGI2Q8N0V4 545 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 PGBD3Q8N328 593 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 FIBINQ8TAL6 211 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 WFIKKN2Q8TEU8 576 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 NUP58Q9BVL2 599 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 CIPCQ9C0C6 399 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 NUCKS1Q9H1E3 243 aaKnown RBP17.16■□□□□ 0.34
LINC00240-203ENST00000606878 WDCPQ9H6R7 721 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 ADAM22Q9P0K1 906 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 BCCIPQ9P287 314 aaKnown RBP eCLIP17.16■□□□□ 0.34
LINC00240-203ENST00000606878 THAP10Q9P2Z0 257 aaPredicted RBP17.16■□□□□ 0.34
LINC00240-203ENST00000606878 XPO7Q9UIA9 1087 aaKnown RBP17.16■□□□□ 0.34
LINC00240-203ENST00000606878 GMEB2Q9UKD1 530 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 PLA2G4CQ9UP65 541 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 PAXBP1Q9Y5B6 917 aa17.16■□□□□ 0.34
LINC00240-203ENST00000606878 TCRBV21S2A2A0A5A6 115 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 F5H5T6 163 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 HLA-FP30511 346 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 SULT1E1P49888 294 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 SGSHP51688 502 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 RPS24P62847 133 aaKnown RBP17.15■□□□□ 0.34
LINC00240-203ENST00000606878 DEUP1Q05D60 604 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 BYSLQ13895 437 aaKnown RBP17.15■□□□□ 0.34
LINC00240-203ENST00000606878 CLEC16AQ2KHT3 1053 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 RAP1GAP2Q684P5 730 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 LAIR1Q6GTX8 287 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 CHST9Q7L1S5 443 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 MFN1Q8IWA4 741 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms