RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 KLHL23Q8NBE8 558 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 SP7Q8TDD2 431 aaPredicted RBP22.29■■□□□ 1.16
USP6NL-204ENST00000606752 OVCA2Q8WZ82 227 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 OLFM3Q96PB7 478 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 SNX10Q9Y5X0 201 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 HACD1B0YJ81 288 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 KCNN4O15554 427 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 TBX18O95935 607 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 ATP2A2P16615 1042 aaKnown RBP22.29■■□□□ 1.16
USP6NL-204ENST00000606752 ELF1P32519 619 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 PMS2P54278 862 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 TBX4P57082 545 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 UAP1Q16222 522 aaPredicted RBP22.29■■□□□ 1.16
USP6NL-204ENST00000606752 C10orf120Q5SQS8 335 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 PDZD8Q8NEN9 1154 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 UBLCP1Q8WVY7 318 aaPredicted RBP22.29■■□□□ 1.16
USP6NL-204ENST00000606752 FOXP3Q9BZS1 431 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 SIK2Q9H0K1 926 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 MARCH2Q9P0N8 246 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 YIPF1Q9Y548 306 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 MYO16Q9Y6X6 1858 aa22.29■■□□□ 1.16
USP6NL-204ENST00000606752 AGPSO00116 658 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 TEX28O15482 410 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 TLL1O43897 1013 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 MFSD11O43934 449 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 EPHB2P29323 1055 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 HTR7P34969 479 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 ACTN2P35609 894 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 MORF4L2Q15014 288 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 TCEAL8Q8IYN2 117 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 ZNF276Q8N554 614 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 FCRL2Q96LA5 508 aaPredicted RBP22.28■■□□□ 1.16
USP6NL-204ENST00000606752 MYRFLQ96LU7 910 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 ZIM3Q96PE6 472 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 QKIQ96PU8 341 aaKnown RBP eCLIP22.28■■□□□ 1.163e-11■■■■■ 70
USP6NL-204ENST00000606752 CDK5RAP1Q96SZ6 601 aaKnown RBP22.28■■□□□ 1.16
USP6NL-204ENST00000606752 RAD54BQ9Y620 910 aa22.28■■□□□ 1.16
USP6NL-204ENST00000606752 PRRG1O14668 218 aa22.27■■□□□ 1.16
USP6NL-204ENST00000606752 HMGA1P17096 107 aaKnown RBP22.27■■□□□ 1.16
USP6NL-204ENST00000606752 GGCXP38435 758 aa22.27■■□□□ 1.16
USP6NL-204ENST00000606752 PDK1Q15118 436 aa22.27■■□□□ 1.16
USP6NL-204ENST00000606752 TRIP4Q15650 581 aaPredicted RBP22.27■■□□□ 1.16
USP6NL-204ENST00000606752 RNASEH2BQ5TBB1 312 aaKnown RBP22.27■■□□□ 1.16
USP6NL-204ENST00000606752 SNX30Q5VWJ9 437 aa22.27■■□□□ 1.16
USP6NL-204ENST00000606752 TFB1MQ8WVM0 346 aaKnown RBP22.27■■□□□ 1.16
USP6NL-204ENST00000606752 C1orf74Q96LT6 269 aa22.27■■□□□ 1.16
USP6NL-204ENST00000606752 HTATIP2Q9BUP3 242 aa22.27■■□□□ 1.16
USP6NL-204ENST00000606752 MTIF3Q9H2K0 278 aaKnown RBP22.27■■□□□ 1.16
USP6NL-204ENST00000606752 GREB1Q4ZG55 1949 aa22.27■■□□□ 1.16
USP6NL-204ENST00000606752 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.27■■□□□ 1.15
USP6NL-204ENST00000606752 TLR5O60602 858 aa22.27■■□□□ 1.15
USP6NL-204ENST00000606752 FAM193AP78312 1265 aa22.27■■□□□ 1.15
USP6NL-204ENST00000606752 VEPH1Q14D04 833 aa22.27■■□□□ 1.15
USP6NL-204ENST00000606752 HSP90B2PQ58FF3 399 aa22.27■■□□□ 1.15
USP6NL-204ENST00000606752 CCDC25Q86WR0 208 aa22.27■■□□□ 1.15
USP6NL-204ENST00000606752 ZBTB9Q96C00 473 aa22.27■■□□□ 1.15
USP6NL-204ENST00000606752 ZNF512Q96ME7 567 aaPredicted RBP22.27■■□□□ 1.15
USP6NL-204ENST00000606752 RUFY1Q96T51 708 aa22.27■■□□□ 1.15
USP6NL-204ENST00000606752 PABPC3Q9H361 631 aaKnown RBP22.27■■□□□ 1.15
USP6NL-204ENST00000606752 MED4Q9NPJ6 270 aa22.27■■□□□ 1.15
USP6NL-204ENST00000606752 PAK5Q9P286 719 aa22.27■■□□□ 1.15
USP6NL-204ENST00000606752 ZMYND8Q9ULU4 1186 aaPredicted RBP22.27■■□□□ 1.15
USP6NL-204ENST00000606752 ZNF638Q14966 1978 aaKnown RBP22.26■■□□□ 1.15
USP6NL-204ENST00000606752 SRGAP2BP0DMP2 458 aa22.26■■□□□ 1.15
USP6NL-204ENST00000606752 CHKAP35790 457 aa22.26■■□□□ 1.15
USP6NL-204ENST00000606752 BMPR1AP36894 532 aa22.26■■□□□ 1.15
USP6NL-204ENST00000606752 NRLP54845 237 aa22.26■■□□□ 1.15
USP6NL-204ENST00000606752 MLLT6P55198 1093 aaPredicted RBP22.26■■□□□ 1.15
USP6NL-204ENST00000606752 NRG1Q02297 640 aaPredicted RBP22.26■■□□□ 1.15
USP6NL-204ENST00000606752 TAF12Q16514 161 aa22.26■■□□□ 1.15
USP6NL-204ENST00000606752 TADA2BQ86TJ2 420 aa22.26■■□□□ 1.15
USP6NL-204ENST00000606752 MIB1Q86YT6 1006 aa22.26■■□□□ 1.15
USP6NL-204ENST00000606752 PPIL6Q8IXY8 311 aa22.26■■□□□ 1.15
USP6NL-204ENST00000606752 ZCCHC9Q8N567 271 aaKnown RBP22.26■■□□□ 1.15
USP6NL-204ENST00000606752 LBHD1Q9BQE6 289 aaPredicted RBP22.26■■□□□ 1.15
USP6NL-204ENST00000606752 CCSER2Q9H7U1 834 aa22.26■■□□□ 1.15
USP6NL-204ENST00000606752 SLC12A6Q9UHW9 1150 aa22.26■■□□□ 1.15
USP6NL-204ENST00000606752 SHOC2Q9UQ13 582 aa22.26■■□□□ 1.15
USP6NL-204ENST00000606752 FARP1Q9Y4F1 1045 aaPredicted RBP22.26■■□□□ 1.15
USP6NL-204ENST00000606752 CXCL14O95715 111 aa22.25■■□□□ 1.15
USP6NL-204ENST00000606752 MOCS2O96007 188 aaPredicted RBP22.25■■□□□ 1.15
USP6NL-204ENST00000606752 APOEP02649 317 aa22.25■■□□□ 1.15
USP6NL-204ENST00000606752 CNPP09543 421 aaKnown RBP22.25■■□□□ 1.15
USP6NL-204ENST00000606752 KPNA1P52294 538 aaPredicted RBP22.25■■□□□ 1.15
USP6NL-204ENST00000606752 MANEALQ5VSG8 457 aa22.25■■□□□ 1.15
USP6NL-204ENST00000606752 HEATR6Q6AI08 1181 aaKnown RBP22.25■■□□□ 1.15
USP6NL-204ENST00000606752 C4orf22Q6V702 233 aa22.25■■□□□ 1.15
USP6NL-204ENST00000606752 CEP128Q6ZU80 1094 aa22.25■■□□□ 1.15
USP6NL-204ENST00000606752 CCDC33Q8N5R6 958 aa22.25■■□□□ 1.15
USP6NL-204ENST00000606752 LRRN4Q8WUT4 740 aa22.25■■□□□ 1.15
USP6NL-204ENST00000606752 CPT1BQ92523 772 aa22.25■■□□□ 1.15
USP6NL-204ENST00000606752 TRMT2BQ96GJ1 504 aaKnown RBP22.25■■□□□ 1.15
USP6NL-204ENST00000606752 SEMA4AQ9H3S1 761 aa22.25■■□□□ 1.15
USP6NL-204ENST00000606752 XPO7Q9UIA9 1087 aaKnown RBP22.25■■□□□ 1.15
USP6NL-204ENST00000606752 PLAAQ9Y263 795 aa22.25■■□□□ 1.15
USP6NL-204ENST00000606752 SLC12A8A0AV02 714 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 LCHNA4D1U4 455 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 ZNF840PA6NDX5 716 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 SMAPO00193 183 aa22.24■■□□□ 1.15
USP6NL-204ENST00000606752 PPP1R12AO14974 1030 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms