RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 SRPRBQ9Y5M8 271 aaKnown RBP12.32□□□□□ -0.44
PDLIM1P1-201ENST00000604187 B8ZZF3 427 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 YKT6O15498 198 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 KIF20AO95235 890 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 C6P13671 934 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 P4HA1P13674 534 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 HOXD9P28356 352 aaPredicted RBP12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 HLA-FP30511 346 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 KIF11P52732 1056 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PCBP4P57723 403 aaKnown RBP12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ILKQ13418 452 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 BROXQ5VW32 411 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 NCEH1Q6PIU2 408 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CHST9Q7L1S5 443 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 RSRC2Q7L4I2 434 aaKnown RBP12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 EPM2AIP1Q7L775 607 aaPredicted RBP12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CCDC186Q7Z3E2 898 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 UNC93AQ86WB7 457 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CPXM2Q8N436 756 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PDILTQ8N807 584 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ZNF248Q8NDW4 579 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 WFIKKN2Q8TEU8 576 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 GOLGA1Q92805 767 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 TMX3Q96JJ7 454 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 TWNKQ96RR1 684 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 HNRNPABQ99729 332 aaKnown RBP12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PABPC3Q9H361 631 aaKnown RBP12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PNPLA8Q9NP80 782 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ABCB8Q9NUT2 735 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 SERGEFQ9UGK8 458 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 NCKAP1Q9Y2A7 1128 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 KNTC1P50748 2209 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CEP192Q8TEP8 1941 aa12.31□□□□□ -0.44
PDLIM1P1-201ENST00000604187 SLC12A8A0AV02 714 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 LRRIQ3A6PVS8 624 aaPredicted RBP12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 WNT9AO14904 365 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 SLC28A2O43868 658 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 EXOC3O60645 756 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 WISP1O95388 367 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 VNN1O95497 513 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CKMT2P17540 419 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CD38P28907 300 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ASPAP45381 313 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 UCNP55089 124 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 INSM1Q01101 510 aaPredicted RBP12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PKDCCQ504Y2 493 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 SFMBT2Q5VUG0 894 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 KDM7AQ6ZMT4 941 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ADIPOR2Q86V24 386 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 FAM217AQ8IXS0 508 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ZC3H3Q8IXZ2 948 aaKnown RBP12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ZNF507Q8TCN5 953 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 RFFLQ8WZ73 363 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 RSPH9Q9H1X1 276 aaPredicted RBP12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 MTG2Q9H4K7 406 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 EBF2Q9HAK2 575 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 FBXL12Q9NXK8 326 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 MARCH2Q9P0N8 246 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 GGA2Q9UJY4 613 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 STRIP2Q9ULQ0 834 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 SMC3Q9UQE7 1217 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PCDHB1Q9Y5F3 818 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 TEX15Q9BXT5 2789 aa12.3□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 A0A1W2PR77 199 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 STX6O43752 255 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 DLDP09622 509 aaKnown RBP12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PABPC1P11940 636 aaKnown RBP12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 TRIM21P19474 475 aaKnown RBP12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 AP3M2P53677 418 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 GALCP54803 685 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 NXPH1P58417 271 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ASIC1P78348 528 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CEBPZQ03701 1054 aaKnown RBP12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 BNIP3Q12983 259 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 MPPE1Q53F39 396 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 FAM26FQ5R3K3 315 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 MBLAC2Q68D91 279 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 USP30Q70CQ3 517 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 AHI1Q8N157 1196 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ZNF276Q8N554 614 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 CYFIP2Q96F07 1278 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 HIC2Q96JB3 615 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 ADAMTS1Q9UHI8 967 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 FLNCQ14315 2725 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 LRRK2Q5S007 2527 aa12.29□□□□□ -0.44
PDLIM1P1-201ENST00000604187 A0A1W2PP55 124 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 VPS37CA5D8V6 355 aaPredicted RBP12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 LRRC72A6NJI9 287 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 RNASEH2AO75792 299 aaKnown RBP12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 MT-CO3P00414 261 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 C4BPAP04003 597 aaKnown RBP12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 MPOP05164 745 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 KRT10P13645 584 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 SNRPFP62306 86 aaKnown RBP12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 PDE4CQ08493 712 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 KCNJ12Q14500 433 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 SGSM1Q2NKQ1 1148 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 SPOPLQ6IQ16 392 aa12.28□□□□□ -0.44
PDLIM1P1-201ENST00000604187 DHX40Q8IX18 779 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms