RNA–Protein interactions for RNA: ENST00000602591.1

HCG18-246, Transcript of HLA complex group 18, humanhuman

Gene HCG18, Length 1,976 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-246ENST00000602591 RBM41Q96IZ5 413 aaKnown RBP12.25□□□□□ -0.45
HCG18-246ENST00000602591 KLF16Q9BXK1 252 aaPredicted RBP12.25□□□□□ -0.45
HCG18-246ENST00000602591 ASAH2Q9NR71 780 aa12.25□□□□□ -0.45
HCG18-246ENST00000602591 DNMT3LQ9UJW3 386 aa12.25□□□□□ -0.45
HCG18-246ENST00000602591 CREB3O43889 395 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 CST8O60676 142 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 STC2O76061 302 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 LRIG2O94898 1065 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 OLFM2O95897 454 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 CEBPBP17676 345 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 CCR1P32246 355 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 PTPN7P35236 360 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 KCNJ1P48048 391 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 SLC10A2Q12908 348 aaPredicted RBP12.24□□□□□ -0.45
HCG18-246ENST00000602591 SNX1Q13596 522 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 PPP2R5DQ14738 602 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 SYCE2Q6PIF2 218 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 RINLQ6ZS11 566 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 KLHL7Q8IXQ5 586 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 ZNF683Q8IZ20 524 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 FAF2Q96CS3 445 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 RNF157Q96PX1 679 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 TRIM62Q9BVG3 475 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 ARHGEF4Q9NR80 690 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 OR12D3Q9UGF7 316 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 HELZP42694 1942 aaKnown RBP12.24□□□□□ -0.45
HCG18-246ENST00000602591 DOCK4Q8N1I0 1966 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 TRIOO75962 3097 aa12.24□□□□□ -0.45
HCG18-246ENST00000602591 CTAGE15A4D2H0 777 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 TRDMT1O14717 391 aaKnown RBP12.23□□□□□ -0.45
HCG18-246ENST00000602591 CTAGE8P0CG41 777 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 HOXA9P31269 272 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 SLC6A4P31645 630 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 NRLP54845 237 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 GBE1Q04446 702 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 TUBB2AQ13885 445 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 DPYSQ14117 519 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 PPP2R5EQ16537 467 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 ERCC6LQ2NKX8 1250 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 MS4A13Q5J8X5 152 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 EFHC2Q5JST6 749 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 RARS2Q5T160 578 aaKnown RBP12.23□□□□□ -0.45
HCG18-246ENST00000602591 PRUNE1Q86TP1 453 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 CTAGE6Q86UF2 777 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 RFX6Q8HWS3 928 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 CTAGE4Q8IX94 777 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 ZNF276Q8N554 614 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 TTC16Q8NEE8 873 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 KRT12Q99456 494 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 TUBB2BQ9BVA1 445 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 NSUN3Q9H649 340 aaKnown RBP12.23□□□□□ -0.45
HCG18-246ENST00000602591 NDFIP2Q9NV92 336 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 CLEC1BQ9P126 229 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 UXTQ9UBK9 157 aaPredicted RBP12.23□□□□□ -0.45
HCG18-246ENST00000602591 CPQQ9Y646 472 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 MTCH2Q9Y6C9 303 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 ZSCAN5CA6NGD5 496 aaPredicted RBP12.23□□□□□ -0.45
HCG18-246ENST00000602591 TBX10O75333 385 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 PRAMEF12O95522 483 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 HNRNPA1P09651 372 aaKnown RBP eCLIP12.23□□□□□ -0.45
HCG18-246ENST00000602591 SRGAP2BP0DMP2 458 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 PTPN2P17706 415 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 HDCP19113 662 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 CALRP27797 417 aaKnown RBP12.23□□□□□ -0.45
HCG18-246ENST00000602591 GBP1P32455 592 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 PAFAH1B1P43034 410 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 TUBP50607 506 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 SGSHP51688 502 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 TRADDQ15628 312 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 PABPC1LQ4VXU2 614 aaKnown RBP12.23□□□□□ -0.45
HCG18-246ENST00000602591 FAM133BQ5BKY9 247 aaKnown RBP12.23□□□□□ -0.45
HCG18-246ENST00000602591 BRMS1LQ5PSV4 323 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 MANEALQ5VSG8 457 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 SLC9A4Q6AI14 798 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 RFWD3Q6PCD5 774 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 KLHDC10Q6PID8 442 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 C1orf228Q6PIY5 440 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 BBS12Q6ZW61 710 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 SND1Q7KZF4 910 aaKnown RBP eCLIP12.23□□□□□ -0.45
HCG18-246ENST00000602591 CIR1Q86X95 450 aaPredicted RBP12.23□□□□□ -0.45
HCG18-246ENST00000602591 NPWQ8N729 165 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 SMG7Q92540 1137 aaKnown RBP12.23□□□□□ -0.45
HCG18-246ENST00000602591 IGSF8Q969P0 613 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 PRMT1Q99873 361 aaKnown RBP12.23□□□□□ -0.45
HCG18-246ENST00000602591 NCAPGQ9BPX3 1015 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 LRRC1Q9BTT6 524 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 NACA2Q9H009 215 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 OLA1Q9NTK5 396 aaKnown RBP12.23□□□□□ -0.45
HCG18-246ENST00000602591 ZDHHC7Q9NXF8 308 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 MPP6Q9NZW5 540 aa12.23□□□□□ -0.45
HCG18-246ENST00000602591 CTIFO43310 598 aaKnown RBP12.22□□□□□ -0.45
HCG18-246ENST00000602591 KIF1CO43896 1103 aaKnown RBP12.22□□□□□ -0.45
HCG18-246ENST00000602591 PAPLNO95428 1278 aa12.22□□□□□ -0.45
HCG18-246ENST00000602591 C1RP00736 705 aa12.22□□□□□ -0.45
HCG18-246ENST00000602591 MBL2P11226 248 aaPredicted RBP12.22□□□□□ -0.45
HCG18-246ENST00000602591 NUMBP49757 651 aa12.22□□□□□ -0.45
HCG18-246ENST00000602591 COPS2P61201 443 aa12.22□□□□□ -0.45
HCG18-246ENST00000602591 SLC7A5Q01650 507 aa12.22□□□□□ -0.45
HCG18-246ENST00000602591 CKAP4Q07065 602 aaKnown RBP12.22□□□□□ -0.45
HCG18-246ENST00000602591 NNTQ13423 1086 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms