RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 TYW3Q6IPR3 259 aaKnown RBP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 KCTD10Q9H3F6 313 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 MLXQ9UH92 298 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 KCNH4Q9UQ05 1017 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 NAALADL1Q9UQQ1 740 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 STON1Q9Y6Q2 735 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 CD4P01730 458 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 TMEM253P0C7T8 217 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 ACADSBP45954 432 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 PGS1Q32NB8 556 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 TUBA3EQ6PEY2 450 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 NET1Q7Z628 596 aaPredicted RBP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 PGBD3Q8N328 593 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 DHRSXQ8N5I4 330 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 VPS37AQ8NEZ2 397 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 STOML2Q9UJZ1 356 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 MYO5BQ9ULV0 1848 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 C2CD2LO14523 706 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 ALOX5P09917 674 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 ABL2P42684 1182 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 NUDT18Q6ZVK8 323 aa8.9□□□□□ -0.98
CSMD1-216ENST00000602557 TRMT6Q9UJA5 497 aaKnown RBP8.9□□□□□ -0.98
CSMD1-216ENST00000602557 PLOD3O60568 738 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 NADKO95544 446 aaPredicted RBP8.9□□□□□ -0.99
CSMD1-216ENST00000602557 FASP25445 335 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 SLC1A6P48664 564 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 STARP49675 285 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 RTP1P59025 263 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 SNX17Q15036 470 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 OCLNQ16625 522 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 FAM117BQ6P1L5 589 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 SLC13A5Q86YT5 568 aaPredicted RBP8.9□□□□□ -0.99
CSMD1-216ENST00000602557 ZNF75CPQ92670 426 aaPredicted RBP8.9□□□□□ -0.99
CSMD1-216ENST00000602557 SYN2Q92777 582 aaPredicted RBP8.9□□□□□ -0.99
CSMD1-216ENST00000602557 DGCR14Q96DF8 476 aaKnown RBP8.9□□□□□ -0.99
CSMD1-216ENST00000602557 MZF1P28698 734 aaPredicted RBP8.9□□□□□ -0.99
CSMD1-216ENST00000602557 CASP4P49662 377 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 C5orf22Q49AR2 442 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 C6orf52Q5T4I8 152 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 NOTUMQ6P988 496 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 STK32CQ86UX6 486 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.9□□□□□ -0.99
CSMD1-216ENST00000602557 WDR36Q8NI36 951 aaKnown RBP8.9□□□□□ -0.99
CSMD1-216ENST00000602557 RNF38Q9H0F5 515 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 GIN1Q9NXP7 522 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 ING4Q9UNL4 249 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 MAGEB2O15479 319 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 EIF2S1P05198 315 aaKnown RBP8.9□□□□□ -0.99
CSMD1-216ENST00000602557 GSTM1P09488 218 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 CDK16Q00536 496 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 CUL2Q13617 745 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 NFYCQ13952 458 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 PLA2G4EQ3MJ16 856 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 BROXQ5VW32 411 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 ELOA2Q8IYF1 753 aaPredicted RBP8.9□□□□□ -0.99
CSMD1-216ENST00000602557 ZNF333Q96JL9 665 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 DNAJC7Q99615 494 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 MTMR12Q9C0I1 747 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 EMC3Q9P0I2 261 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 BAIAP2Q9UQB8 552 aa8.9□□□□□ -0.99
CSMD1-216ENST00000602557 PNMA8CA0A1B0GUJ8 204 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 SDR42E2A6NKP2 422 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 ANTXR2P58335 489 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 RHAGQ02094 409 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 OR8H3Q8N146 312 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 L3MBTL3Q96JM7 780 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 OSBPL6Q9BZF3 934 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 VPS33BQ9H267 617 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 VPS9D1Q9Y2B5 631 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 FAM92AA1XBS5 289 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 LDLRP01130 860 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 HARS2P49590 506 aaKnown RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 ERVK-9P63128 1117 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 SLC25A3Q00325 362 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 DDR1Q08345 913 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 UBAP2LQ14157 1087 aaKnown RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 NFIXQ14938 502 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 PHC3Q8NDX5 983 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 SPATA16Q9BXB7 569 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 AVENQ9NQS1 362 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 PRR12Q9ULL5 1215 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 PRR23AA6NEV1 266 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 H2AFYO75367 372 aaKnown RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 RUNDC3AQ59EK9 446 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 BRINP3Q76B58 766 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 CAMKK1Q8N5S9 505 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 BPIFB6Q8NFQ5 453 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 CDRT15Q96T59 188 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 TMEM39BQ9GZU3 492 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 APOA4P06727 396 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 MAGEA10P43363 369 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 TSNQ15631 228 aaKnown RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 C16orf86Q6ZW13 317 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 EFL1Q7Z2Z2 1120 aaKnown RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 KCNH7Q9NS40 1196 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 ARPC4-TTLL3A0A0A6YYG9 625 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 RIPK2O43353 540 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 TRMUO75648 421 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms