RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 PCDHB4Q9Y5E5 795 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 CACNA1EQ15878 2313 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 SPEGQ15772 3267 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 PCNX2A6NKB5 2137 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 METTL12A8MUP2 240 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 H0Y626 953 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 RNF225M0QZC1 329 aaPredicted RBP13.71□□□□□ -0.21
RPS28-204ENST00000602140 PSMA7O14818 248 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 GABBR2O75899 941 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 TRIM16O95361 564 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 LATS1O95835 1130 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 IGLV3-19P01714 112 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 PAEPP09466 180 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 SGSHP51688 502 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 CAMK2GQ13555 558 aaPredicted RBP13.71□□□□□ -0.21
RPS28-204ENST00000602140 STIM1Q13586 685 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 TRIP6Q15654 476 aaKnown RBP13.71□□□□□ -0.21
RPS28-204ENST00000602140 ZNF423Q2M1K9 1284 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 PMF1Q6P1K2 205 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 MSANTD2Q6P1R3 559 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 ADIPOR2Q86V24 386 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 NAXDQ8IW45 347 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 SCML4Q8N228 414 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 PPM1KQ8N3J5 372 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 ZNF366Q8N895 744 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 WFIKKN2Q8TEU8 576 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 KAT5Q92993 513 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 NT5C1BQ96P26 610 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 ZSWIM1Q9BR11 485 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 GTPBP4Q9BZE4 634 aaKnown RBP13.71□□□□□ -0.21
RPS28-204ENST00000602140 TMEM245Q9H330 911 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 EIF2B4Q9UI10 523 aaKnown RBP13.71□□□□□ -0.21
RPS28-204ENST00000602140 HOOK1Q9UJC3 728 aaKnown RBP13.71□□□□□ -0.21
RPS28-204ENST00000602140 GGA2Q9UJY4 613 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 PLA2G4CQ9UP65 541 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 MSRB2Q9Y3D2 182 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 PCDHB9Q9Y5E1 797 aa13.71□□□□□ -0.21
RPS28-204ENST00000602140 IGF2RP11717 2491 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 GOLGA6L7A0A1B0GV03 622 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 M0QYV0 167 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 BCAT2O15382 392 aaPredicted RBP13.7□□□□□ -0.22
RPS28-204ENST00000602140 TBL1XO60907 577 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 CALCAP01258 141 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 PABPC1P11940 636 aaKnown RBP13.7□□□□□ -0.22
RPS28-204ENST00000602140 CD44P16070 742 aaKnown RBP13.7□□□□□ -0.22
RPS28-204ENST00000602140 BRD2P25440 801 aaKnown RBP13.7□□□□□ -0.22
RPS28-204ENST00000602140 CNGA2Q16280 664 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 CCDC40Q4G0X9 1142 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 RFWD3Q6PCD5 774 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 KIAA0907Q7Z7F0 614 aaPredicted RBP13.7□□□□□ -0.22
RPS28-204ENST00000602140 UNC45BQ8IWX7 931 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 AHI1Q8N157 1196 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.7□□□□□ -0.22
RPS28-204ENST00000602140 WFDC5Q8TCV5 224 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 CLEC4CQ8WTT0 213 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 ZCCHC14Q8WYQ9 949 aaKnown RBP13.7□□□□□ -0.22
RPS28-204ENST00000602140 IRGQQ8WZA9 623 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 DHTKD1Q96HY7 919 aaPredicted RBP13.7□□□□□ -0.22
RPS28-204ENST00000602140 CEP63Q96MT8 703 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 TIGD1Q96MW7 591 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 LHX5Q9H2C1 402 aa13.7□□□□□ -0.22
RPS28-204ENST00000602140 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.7□□□□□ -0.22
RPS28-204ENST00000602140 CKAP5Q14008 2032 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 PMM2O15305 246 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 IGLV3-27P01718 113 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 LTFP02788 710 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 CD70P32970 193 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 ACSL1P33121 698 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 SLC11A2P49281 568 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 TBX4P57082 545 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 PTPRNQ16849 979 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 PIK3R6Q5UE93 754 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 MBLAC2Q68D91 279 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 KLHL10Q6JEL2 608 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 RAB44Q7Z6P3 723 aaPredicted RBP13.69□□□□□ -0.22
RPS28-204ENST00000602140 SNX19Q92543 992 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 GOLGA1Q92805 767 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 MIS12Q9H081 205 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 C6orf106Q9H6K1 298 aaPredicted RBP13.69□□□□□ -0.22
RPS28-204ENST00000602140 GAREM1Q9H706 876 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 IL21RQ9HBE5 538 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 MAN1B1Q9UKM7 699 aa13.69□□□□□ -0.22
RPS28-204ENST00000602140 SRRM3A6NNA2 597 aaPredicted RBP13.68□□□□□ -0.22
RPS28-204ENST00000602140 IRAK2O43187 625 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 ACSL4O60488 711 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 CER1O95813 267 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 ATP5BP06576 529 aaKnown RBP13.68□□□□□ -0.22
RPS28-204ENST00000602140 DLDP09622 509 aaKnown RBP13.68□□□□□ -0.22
RPS28-204ENST00000602140 POLR2EP19388 210 aaKnown RBP13.68□□□□□ -0.22
RPS28-204ENST00000602140 SLC6A4P31645 630 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 MATKP42679 507 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 RPS14P62263 151 aaKnown RBP13.68□□□□□ -0.22
RPS28-204ENST00000602140 BNC1Q01954 994 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 RING1Q06587 406 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 CETN1Q12798 172 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 STILQ15468 1287 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 HLA-BQ31612 363 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 FAM133BQ5BKY9 247 aaKnown RBP13.68□□□□□ -0.22
RPS28-204ENST00000602140 MPP7Q5T2T1 576 aa13.68□□□□□ -0.22
RPS28-204ENST00000602140 NUGGCQ68CJ6 796 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms