RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 FAM71AQ8IYT1 594 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.66■□□□□ 0.1
LIG1-215ENST00000597901 GPT2Q8TD30 523 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 DDX50Q9BQ39 737 aaKnown RBP15.66■□□□□ 0.1
LIG1-215ENST00000597901 TRIM62Q9BVG3 475 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 ITM2CQ9NQX7 267 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 ABCB8Q9NUT2 735 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 STIM2Q9P246 746 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 CYP8B1Q9UNU6 501 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 PLA2G4CQ9UP65 541 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 CEP250Q9BV73 2442 aa15.66■□□□□ 0.1
LIG1-215ENST00000597901 DCHS1Q96JQ0 3298 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 AP5Z1O43299 807 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 TRUB2O95900 331 aaKnown RBP15.65■□□□□ 0.1
LIG1-215ENST00000597901 BPIFB4P59827 614 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 RPL6Q02878 288 aaKnown RBP15.65■□□□□ 0.1
LIG1-215ENST00000597901 ARID5AQ03989 594 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 EIF4EBP2Q13542 120 aaPredicted RBP15.65■□□□□ 0.1
LIG1-215ENST00000597901 DRAP1Q14919 205 aaPredicted RBP15.65■□□□□ 0.1
LIG1-215ENST00000597901 ZC3H12AQ5D1E8 599 aaKnown RBP15.65■□□□□ 0.1
LIG1-215ENST00000597901 TCP11X2Q5H9J9 407 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 PPM1JQ5JR12 505 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 EFHC1Q5JVL4 640 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 KLHDC7AQ5VTJ3 777 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 RNF43Q68DV7 783 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 KIAA1324Q6UXG2 1013 aaKnown RBP15.65■□□□□ 0.1
LIG1-215ENST00000597901 TAC4Q86UU9 113 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 TMPRSS6Q8IU80 811 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 SYT12Q8IV01 421 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 PASD1Q8IV76 773 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 ENOX1Q8TC92 643 aaKnown RBP15.65■□□□□ 0.1
LIG1-215ENST00000597901 WFIKKN2Q8TEU8 576 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 MYEOVQ96EZ4 313 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 GBP4Q96PP9 640 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 CPXM1Q96SM3 734 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 MKRN2Q9H000 416 aaKnown RBP15.65■□□□□ 0.1
LIG1-215ENST00000597901 PRDM16Q9HAZ2 1276 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 GGA2Q9UJY4 613 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 PILRBQ9UKJ0 227 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 NFE2L3Q9Y4A8 694 aa15.65■□□□□ 0.1
LIG1-215ENST00000597901 KIAA1549LQ6ZVL6 1849 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 DMXL1Q9Y485 3027 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 C4orf47A7E2U8 309 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 PES1O00541 588 aaKnown RBP15.64■□□□□ 0.09
LIG1-215ENST00000597901 EPHX1P07099 455 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 GLI1P08151 1106 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 PNMA6AP0CW24 399 aaPredicted RBP15.64■□□□□ 0.09
LIG1-215ENST00000597901 PABPC1P11940 636 aaKnown RBP15.64■□□□□ 0.09
LIG1-215ENST00000597901 ITPKAP23677 461 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 PRKCHP24723 683 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 EEF1GP26641 437 aaKnown RBP15.64■□□□□ 0.09
LIG1-215ENST00000597901 CD70P32970 193 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 RPS24P62847 133 aaKnown RBP15.64■□□□□ 0.09
LIG1-215ENST00000597901 PITX1P78337 314 aaPredicted RBP15.64■□□□□ 0.09
LIG1-215ENST00000597901 ZNF33AQ06730 810 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 DCAF6Q58WW2 860 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 MS4A13Q5J8X5 152 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 LYSMD4Q5XG99 296 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 MBLAC2Q68D91 279 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 SERPINA13PQ6UXR4 307 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 DEFB106AQ8N104 65 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 FIBINQ8TAL6 211 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 WFDC5Q8TCV5 224 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 CYB5D2Q8WUJ1 264 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 ZNF419Q96HQ0 510 aaPredicted RBP15.64■□□□□ 0.09
LIG1-215ENST00000597901 LMLNQ96KR4 655 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 NOX5Q96PH1 765 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 CD93Q9NPY3 652 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.64■□□□□ 0.09
LIG1-215ENST00000597901 ASNSD1Q9NWL6 643 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 XPO7Q9UIA9 1087 aaKnown RBP15.64■□□□□ 0.09
LIG1-215ENST00000597901 ABCA7Q8IZY2 2146 aa15.64■□□□□ 0.09
LIG1-215ENST00000597901 LNP1A1A4G5 178 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 MOCS2O96007 188 aaPredicted RBP15.63■□□□□ 0.09
LIG1-215ENST00000597901 IGLV3-25P01717 112 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 ATP5BP06576 529 aaKnown RBP15.63■□□□□ 0.09
LIG1-215ENST00000597901 HLA-EP13747 358 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 POLR2EP19388 210 aaKnown RBP15.63■□□□□ 0.09
LIG1-215ENST00000597901 DPP6P42658 865 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 SNX16P57768 344 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 CDK17Q00537 523 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 PTPRNQ16849 979 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 TRIM61Q5EBN2 209 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 OR6B2Q6IFH4 312 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 RBM43Q6ZSC3 357 aaKnown RBP15.63■□□□□ 0.09
LIG1-215ENST00000597901 C11orf57Q6ZUT1 292 aaPredicted RBP15.63■□□□□ 0.09
LIG1-215ENST00000597901 SLC41A1Q8IVJ1 513 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 AHI1Q8N157 1196 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 CFAP52Q8N1V2 620 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 ZNF557Q8N988 423 aaPredicted RBP15.63■□□□□ 0.09
LIG1-215ENST00000597901 HJURPQ8NCD3 748 aaPredicted RBP15.63■□□□□ 0.09
LIG1-215ENST00000597901 C1orf131Q8NDD1 294 aaKnown RBP15.63■□□□□ 0.09
LIG1-215ENST00000597901 SIPA1Q96FS4 1042 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 SLC2A13Q96QE2 648 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 EDEM2Q9BV94 578 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 LSM14BQ9BX40 385 aaKnown RBP15.63■□□□□ 0.09
LIG1-215ENST00000597901 NAA15Q9BXJ9 866 aaKnown RBP15.63■□□□□ 0.09
LIG1-215ENST00000597901 NUCKS1Q9H1E3 243 aaKnown RBP15.63■□□□□ 0.09
LIG1-215ENST00000597901 TMEM245Q9H330 911 aa15.63■□□□□ 0.09
LIG1-215ENST00000597901 PLCB1Q9NQ66 1216 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms