RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 TULP2O00295 520 aa19.44■□□□□ 0.7
PDE4C-208ENST00000595343 PRR29P0C7W0 189 aa19.44■□□□□ 0.7
PDE4C-208ENST00000595343 MCCD1P59942 119 aaPredicted RBP19.44■□□□□ 0.7
PDE4C-208ENST00000595343 TEAD4Q15561 434 aa19.44■□□□□ 0.7
PDE4C-208ENST00000595343 CHST9Q7L1S5 443 aa19.44■□□□□ 0.7
PDE4C-208ENST00000595343 FBXL13Q8NEE6 735 aa19.44■□□□□ 0.7
PDE4C-208ENST00000595343 WFIKKN2Q8TEU8 576 aa19.44■□□□□ 0.7
PDE4C-208ENST00000595343 HNRNPLLQ8WVV9 542 aaKnown RBP19.44■□□□□ 0.7
PDE4C-208ENST00000595343 CCDC47Q96A33 483 aaKnown RBP19.44■□□□□ 0.7
PDE4C-208ENST00000595343 TM9SF3Q9HD45 589 aa19.44■□□□□ 0.7
PDE4C-208ENST00000595343 OSGEPQ9NPF4 335 aa19.44■□□□□ 0.7
PDE4C-208ENST00000595343 RAB20Q9NX57 234 aa19.44■□□□□ 0.7
PDE4C-208ENST00000595343 STOML2Q9UJZ1 356 aa19.44■□□□□ 0.7
PDE4C-208ENST00000595343 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.44■□□□□ 0.7
PDE4C-208ENST00000595343 ANKRD6Q9Y2G4 727 aa19.44■□□□□ 0.7
PDE4C-208ENST00000595343 HBS1LQ9Y450 684 aaKnown RBP19.44■□□□□ 0.7
PDE4C-208ENST00000595343 URB1O60287 2271 aaKnown RBP19.43■□□□□ 0.7
PDE4C-208ENST00000595343 SEMA4FO95754 770 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 GRIA4P48058 902 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 MXI1P50539 228 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 ZNF445P59923 1031 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 PDE4CQ08493 712 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 PTPRNQ16849 979 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 GOLGA7BQ2TAP0 167 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 ADIPOR2Q86V24 386 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 MARCH9Q86YJ5 346 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 GUF1Q8N442 669 aaKnown RBP19.43■□□□□ 0.7
PDE4C-208ENST00000595343 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.43■□□□□ 0.7
PDE4C-208ENST00000595343 RNF139Q8WU17 664 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 TATDN2Q93075 761 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 BIRC7Q96CA5 298 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 TMA16Q96EY4 203 aaKnown RBP19.43■□□□□ 0.7
PDE4C-208ENST00000595343 BTBD1Q9H0C5 482 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 PRSS16Q9NQE7 514 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 ABCB8Q9NUT2 735 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 DKK4Q9UBT3 224 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 SFMBT1Q9UHJ3 866 aa19.43■□□□□ 0.7
PDE4C-208ENST00000595343 MUC22E2RYF6 1773 aaPredicted RBP19.42■□□□□ 0.7
PDE4C-208ENST00000595343 KCNK3O14649 394 aa19.42■□□□□ 0.7
PDE4C-208ENST00000595343 XPO1O14980 1071 aaKnown RBP19.42■□□□□ 0.7
PDE4C-208ENST00000595343 HSP90AA1P07900 732 aaKnown RBP19.42■□□□□ 0.7
PDE4C-208ENST00000595343 RPS14P62263 151 aaKnown RBP19.42■□□□□ 0.7
PDE4C-208ENST00000595343 ZBTB16Q05516 673 aa19.42■□□□□ 0.7
PDE4C-208ENST00000595343 DPYDQ12882 1025 aa19.42■□□□□ 0.7
PDE4C-208ENST00000595343 ZCWPW2Q504Y3 356 aa19.42■□□□□ 0.7
PDE4C-208ENST00000595343 ADGRF1Q5T601 910 aa19.42■□□□□ 0.7
PDE4C-208ENST00000595343 KIAA0907Q7Z7F0 614 aaPredicted RBP19.42■□□□□ 0.7
PDE4C-208ENST00000595343 ZC3H3Q8IXZ2 948 aaKnown RBP19.42■□□□□ 0.7
PDE4C-208ENST00000595343 GALNT15Q8N3T1 639 aa19.42■□□□□ 0.7
PDE4C-208ENST00000595343 EDEM1Q92611 657 aa19.42■□□□□ 0.7
PDE4C-208ENST00000595343 FBRSQ9HAH7 460 aa19.42■□□□□ 0.7
PDE4C-208ENST00000595343 LRRC4Q9HBW1 653 aa19.42■□□□□ 0.7
PDE4C-208ENST00000595343 GGA2Q9UJY4 613 aa19.42■□□□□ 0.7
PDE4C-208ENST00000595343 TSPAN16Q9UKR8 245 aa19.42■□□□□ 0.7
PDE4C-208ENST00000595343 LOC400499M0QZD8 3231 aa19.42■□□□□ 0.7
PDE4C-208ENST00000595343 TNFSF14O43557 240 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 FSBPO95073 299 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 LATS1O95835 1130 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 DNTTP04053 509 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 PABPC1P11940 636 aaKnown RBP19.41■□□□□ 0.7
PDE4C-208ENST00000595343 CD27P26842 260 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 GRK6P43250 576 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 SYKP43405 635 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 BCAT1P54687 386 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 CYP4F3Q08477 520 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 ADIGQ0VDE8 80 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 BSPRYQ5W0U4 402 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 MBLAC2Q68D91 279 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 LAYNQ6UX15 382 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 AHI1Q8N157 1196 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 IGSF8Q969P0 613 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 EEF2KMTQ96G04 330 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 IPO9Q96P70 1041 aaKnown RBP19.41■□□□□ 0.7
PDE4C-208ENST00000595343 SCUBE2Q9NQ36 999 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 TMEM131Q92545 1883 aa19.41■□□□□ 0.7
PDE4C-208ENST00000595343 TRABD2BA6NFA1 517 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 YJEFN3A6XGL0 299 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 E7ENQ6 273 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 H0Y8X5 98 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 MSI1O43347 362 aaKnown RBP19.4■□□□□ 0.7
PDE4C-208ENST00000595343 PCDHGA12O60330 932 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 STX10O60499 249 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 ATP5BP06576 529 aaKnown RBP19.4■□□□□ 0.7
PDE4C-208ENST00000595343 DLDP09622 509 aaKnown RBP19.4■□□□□ 0.7
PDE4C-208ENST00000595343 CCT8P50990 548 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 SGSHP51688 502 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 NDUFA8P51970 172 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 BST2Q10589 180 aaKnown RBP19.4■□□□□ 0.7
PDE4C-208ENST00000595343 CAMK2BQ13554 666 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 SGO2Q562F6 1265 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 KCNT1Q5JUK3 1230 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 SGK2Q9HBY8 427 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 HESX1Q9UBX0 185 aa19.4■□□□□ 0.7
PDE4C-208ENST00000595343 SMG1Q96Q15 3661 aaKnown RBP19.39■□□□□ 0.69
PDE4C-208ENST00000595343 EDRF1Q3B7T1 1238 aa19.39■□□□□ 0.69
PDE4C-208ENST00000595343 TTC31Q49AM3 519 aaPredicted RBP19.39■□□□□ 0.69
PDE4C-208ENST00000595343 HSCBQ8IWL3 235 aa19.39■□□□□ 0.69
PDE4C-208ENST00000595343 SIX6OS1Q8N1H7 587 aa19.39■□□□□ 0.69
PDE4C-208ENST00000595343 UBA3Q8TBC4 463 aa19.39■□□□□ 0.69
PDE4C-208ENST00000595343 WFDC5Q8TCV5 224 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms