RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 PAGE1O75459 146 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 SASH3O75995 380 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 GAS8O95995 478 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 LRG1P02750 347 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 SLC2A3P11169 496 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 GGCXP38435 758 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 PPP3CCP48454 512 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 HCAR3P49019 387 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 ZNF135P52742 658 aaPredicted RBP15.7■□□□□ 0.1
VRK3-207ENST00000594092 DRG2P55039 364 aaKnown RBP15.7■□□□□ 0.1
VRK3-207ENST00000594092 LMNB2Q03252 620 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 NCBP2-AS2Q69YL0 99 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 TMEM150AQ86TG1 271 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 DDX42Q86XP3 938 aaKnown RBP eCLIP15.7■□□□□ 0.1
VRK3-207ENST00000594092 P3H4Q92791 437 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 EPAS1Q99814 870 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 SIK2Q9H0K1 926 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 NKX2-4Q9H2Z4 354 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 CERS4Q9HA82 394 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 PRDM16Q9HAZ2 1276 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 IL21Q9HBE4 155 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 XPO7Q9UIA9 1087 aaKnown RBP15.7■□□□□ 0.1
VRK3-207ENST00000594092 DNMT3LQ9UJW3 386 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 ZNF148Q9UQR1 794 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 MFHAS1Q9Y4C4 1052 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 LAMA3Q16787 3333 aa15.7■□□□□ 0.1
VRK3-207ENST00000594092 H0YGN5 161 aa15.69■□□□□ 0.1
VRK3-207ENST00000594092 MAP2K7O14733 419 aa15.69■□□□□ 0.1
VRK3-207ENST00000594092 COCHO43405 550 aa15.69■□□□□ 0.1
VRK3-207ENST00000594092 LRIG2O94898 1065 aa15.69■□□□□ 0.1
VRK3-207ENST00000594092 MOCS2O96007 188 aaPredicted RBP15.69■□□□□ 0.1
VRK3-207ENST00000594092 IGLV3-27P01718 113 aa15.69■□□□□ 0.1
VRK3-207ENST00000594092 F11P03951 625 aa15.69■□□□□ 0.1
VRK3-207ENST00000594092 ATP5C1P36542 298 aaKnown RBP15.69■□□□□ 0.1
VRK3-207ENST00000594092 TUBP50607 506 aa15.69■□□□□ 0.1
VRK3-207ENST00000594092 TPI1P60174 286 aa15.69■□□□□ 0.1
VRK3-207ENST00000594092 EIF3EP60228 445 aaKnown RBP15.69■□□□□ 0.1
VRK3-207ENST00000594092 PDE12Q6L8Q7 609 aaKnown RBP15.69■□□□□ 0.1
VRK3-207ENST00000594092 KLHDC10Q6PID8 442 aa15.69■□□□□ 0.1
VRK3-207ENST00000594092 GDAP1L1Q96MZ0 367 aa15.69■□□□□ 0.1
VRK3-207ENST00000594092 NEU2Q9Y3R4 380 aa15.69■□□□□ 0.1
VRK3-207ENST00000594092 HEY1Q9Y5J3 304 aa15.69■□□□□ 0.1
VRK3-207ENST00000594092 MCF2LO15068 1137 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 DCLK1O15075 740 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 CLASP2O75122 1294 aaKnown RBP15.68■□□□□ 0.1
VRK3-207ENST00000594092 C1RP00736 705 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 APOEP02649 317 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 ITGAVP06756 1048 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 HMBSP08397 361 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 GBE1Q04446 702 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 RING1Q06587 406 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 SLC10A2Q12908 348 aaPredicted RBP15.68■□□□□ 0.1
VRK3-207ENST00000594092 ALLCQ8N6M5 410 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 SLC22A17Q8WUG5 538 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 LRRC3Q9BY71 257 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 ACBD3Q9H3P7 528 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 MSRAQ9UJ68 235 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 HBS1LQ9Y450 684 aaKnown RBP15.68■□□□□ 0.1
VRK3-207ENST00000594092 HS3ST4Q9Y661 456 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 MTCL1Q9Y4B5 1905 aaKnown RBP15.68■□□□□ 0.1
VRK3-207ENST00000594092 C2orf78A6NCI8 922 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 OAS1P00973 400 aaKnown RBP15.68■□□□□ 0.1
VRK3-207ENST00000594092 RBP3P10745 1247 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 ERCC2P18074 760 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 ECHS1P30084 290 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 KPNA1P52294 538 aaPredicted RBP15.68■□□□□ 0.1
VRK3-207ENST00000594092 PTK6Q13882 451 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 RAB30Q15771 203 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 PPM1LQ5SGD2 360 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 ARTNQ5T4W7 220 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 PIK3R6Q5UE93 754 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 MANEALQ5VSG8 457 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 TMC8Q8IU68 726 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 HS6ST3Q8IZP7 471 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 ELMOD1Q8N336 334 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 TMEM121Q9BTD3 319 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 NACA2Q9H009 215 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 ANAPC1Q9H1A4 1944 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 C10orf88Q9H8K7 445 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 MAN1C1Q9NR34 630 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 NEU3Q9UQ49 428 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 SNX24Q9Y343 169 aa15.68■□□□□ 0.1
VRK3-207ENST00000594092 CCL16O15467 120 aa15.67■□□□□ 0.1
VRK3-207ENST00000594092 MAP3K6O95382 1288 aa15.67■□□□□ 0.1
VRK3-207ENST00000594092 EPCAMP16422 314 aa15.67■□□□□ 0.1
VRK3-207ENST00000594092 EPHB2P29323 1055 aa15.67■□□□□ 0.1
VRK3-207ENST00000594092 NR2C2P49116 596 aa15.67■□□□□ 0.1
VRK3-207ENST00000594092 MLLT6P55198 1093 aaPredicted RBP15.67■□□□□ 0.1
VRK3-207ENST00000594092 NRG1Q02297 640 aaPredicted RBP15.67■□□□□ 0.1
VRK3-207ENST00000594092 PAFAH1B3Q15102 231 aaKnown RBP15.67■□□□□ 0.1
VRK3-207ENST00000594092 PABPC1LQ4VXU2 614 aaKnown RBP15.67■□□□□ 0.1
VRK3-207ENST00000594092 PPP2R2DQ66LE6 453 aa15.67■□□□□ 0.1
VRK3-207ENST00000594092 RTL10Q7L3V2 364 aa15.67■□□□□ 0.1
VRK3-207ENST00000594092 GSTA5Q7RTV2 222 aa15.67■□□□□ 0.1
VRK3-207ENST00000594092 ZC3H18Q86VM9 953 aaKnown RBP15.67■□□□□ 0.1
VRK3-207ENST00000594092 ATP6V0D2Q8N8Y2 350 aa15.67■□□□□ 0.1
VRK3-207ENST00000594092 BTN2A3PQ96KV6 586 aa15.67■□□□□ 0.1
VRK3-207ENST00000594092 C1orf74Q96LT6 269 aa15.67■□□□□ 0.1
VRK3-207ENST00000594092 RNF38Q9H0F5 515 aa15.67■□□□□ 0.1
VRK3-207ENST00000594092 VIPAS39Q9H9C1 493 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms