RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 FXNQ16595 210 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 MEA1Q16626 185 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 PRSS36Q5K4E3 855 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 PMF1Q6P1K2 205 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 CYP26C1Q6V0L0 522 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 TRIM72Q6ZMU5 477 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 MMS22LQ6ZRQ5 1243 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 GAREM2Q75VX8 874 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 RSRC2Q7L4I2 434 aaKnown RBP6.71□□□□□ -1.34
VPS4B-205ENST00000591383 PDZD3Q86UT5 571 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 VPS36Q86VN1 386 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 ZNF677Q86XU0 584 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 CNGA4Q8IV77 575 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 TMEM35BQ8NCS4 154 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 PDZD8Q8NEN9 1154 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.71□□□□□ -1.34
VPS4B-205ENST00000591383 CLEC4CQ8WTT0 213 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 ZNF606Q8WXB4 792 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 GOLGA1Q92805 767 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 FGF13Q92913 245 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 ACSF2Q96CM8 615 aaPredicted RBP6.71□□□□□ -1.34
VPS4B-205ENST00000591383 TRMT2BQ96GJ1 504 aaKnown RBP6.71□□□□□ -1.34
VPS4B-205ENST00000591383 MYADMQ96S97 322 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 KXD1Q9BQD3 176 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 C11orf70Q9BRQ4 267 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 TTLL2Q9BWV7 592 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 LACRTQ9GZZ8 138 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 DEF6Q9H4E7 631 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 FBXO44Q9H4M3 255 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 GRPEL1Q9HAV7 217 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 CSNK1G1Q9HCP0 422 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 PNPLA8Q9NP80 782 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 ZNHIT6Q9NWK9 470 aaKnown RBP6.71□□□□□ -1.34
VPS4B-205ENST00000591383 TRPM5Q9NZQ8 1165 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 TJP2Q9UDY2 1190 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 CYTH4Q9UIA0 394 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 CAPN11Q9UMQ6 739 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 SLC6A14Q9UN76 642 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 TRIM33Q9UPN9 1127 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 NR2E1Q9Y466 385 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 PCDHB14Q9Y5E9 798 aa6.71□□□□□ -1.34
VPS4B-205ENST00000591383 KIF26AQ9ULI4 1882 aaPredicted RBP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 TRAV19A0A0A6YYK7 116 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 A0A1W2PQH9 124 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 ESYT3A0FGR9 886 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 C2orf78A6NCI8 922 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 TMCO5BA8MYB1 307 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 AKR1B15C9JRZ8 316 aaPredicted RBP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 GOLGA8SH3BPF8 625 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 GFRA3O60609 400 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 ATE1O95260 518 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 PRAMEF12O95522 483 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 ZBED1O96006 694 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 ERBB2P04626 1255 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 SERPING1P05155 500 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 PLEKP08567 350 aaPredicted RBP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 IRF1P10914 325 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 MBL2P11226 248 aaPredicted RBP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 SKILP12757 684 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 CHRNB2P17787 502 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 CDC25BP30305 580 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 AVPR1AP37288 418 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 KIF11P52732 1056 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 EPHA5P54756 1037 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 ADKP55263 362 aaKnown RBP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 PCBP4P57723 403 aaKnown RBP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 YWHAGP61981 247 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 NOMO3P69849 1222 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 CLEC16AQ2KHT3 1053 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 PTPN20Q4JDL3 420 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 C2CD6Q53TS8 623 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 C10orf120Q5SQS8 335 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 TXNDC8Q6A555 127 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 OR6B2Q6IFH4 312 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 TOGARAM2Q6ZUX3 1019 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 FAM183BPQ6ZVS7 135 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 OTOP3Q7RTS5 596 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 CCDC186Q7Z3E2 898 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 MAB21L3Q8N8X9 362 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 SLC30A5Q8TAD4 765 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 ATXN2LQ8WWM7 1075 aaKnown RBP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 CPA5Q8WXQ8 436 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 DDX1Q92499 740 aaKnown RBP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 NDRG1Q92597 394 aaKnown RBP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 MCRS1Q96EZ8 462 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 PPP1R13BQ96KQ4 1090 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 CEP295NLQ96MC4 621 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 ASB2Q96Q27 587 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 CPXM1Q96SM3 734 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 AGPAT1Q99943 283 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 PHF7Q9BWX1 381 aaPredicted RBP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 EDEM3Q9BZQ6 932 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 SMG9Q9H0W8 520 aaKnown RBP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 HAUS4Q9H6D7 363 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 TLR8Q9NR97 1041 aaKnown RBP6.7□□□□□ -1.34
VPS4B-205ENST00000591383 ABHD10Q9NUJ1 306 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 SMPD4Q9NXE4 827 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 RASAL2Q9UJF2 1139 aa6.7□□□□□ -1.34
VPS4B-205ENST00000591383 CDH7Q9ULB5 785 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms