RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 MAPRE2Q15555 327 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 PAGE2BQ5JRK9 111 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 TTI2Q6NXR4 508 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 TRIM65Q6PJ69 517 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 ANO5Q75V66 913 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 CHST9Q7L1S5 443 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 ATOH1Q92858 354 aaPredicted RBP6.46□□□□□ -1.37
SMAD4-212ENST00000591126 RAB7BQ96AH8 199 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 LRIG1Q96JA1 1093 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 SEMA4AQ9H3S1 761 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 NDE1Q9NXR1 346 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 A0A0B4J269 797 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 A0A1B0GVM2 712 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 TCAF2A6NFQ2 919 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 RHPN2P1A8MT19 583 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 PIGRP01833 764 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 FGFR4P22455 802 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 GPD2P43304 727 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 CASP6P55212 293 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 HPCAP84074 193 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 MBTD1Q05BQ5 628 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 DUSP4Q13115 394 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 SMAD4Q13485 552 aaKnown RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 BRD3Q15059 726 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 TRIP4Q15650 581 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 RSPO2Q6UXX9 243 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 CYP2U1Q7Z449 544 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 VN1R2Q8NFZ6 395 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 WDR48Q8TAF3 677 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 OSBPL9Q96SU4 736 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 OSBPL2Q9H1P3 480 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 MAGEH1Q9H213 219 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 PDZD7Q9H5P4 517 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 CERS4Q9HA82 394 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 AIPL1Q9NZN9 384 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 TRIM33Q9UPN9 1127 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 YIPF1Q9Y548 306 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 LAMB4A4D0S4 1761 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 PEAK1Q9H792 1746 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 PTPRJQ12913 1337 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 OPHN1O60890 802 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 SUPT3HO75486 399 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 CATP04040 527 aaKnown RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 ADH5P11766 374 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 UQCRBP14927 111 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 VARSP26640 1264 aaKnown RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 HMOX2P30519 316 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 GPR1P46091 355 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 NNTQ13423 1086 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 ALG11Q2TAA5 492 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 PKN3Q6P5Z2 889 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 FAM47EQ6ZV65 393 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 RASSF3Q86WH2 238 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 SMYD4Q8IYR2 804 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 OR6C4Q8NGE1 309 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 FAM172AQ8WUF8 416 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 SMARCD2Q92925 531 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 NTPCRQ9BSD7 190 aaKnown RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 BTBD1Q9H0C5 482 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 RIC8BQ9NVN3 520 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 CALCOCO1Q9P1Z2 691 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 SCN11AQ9UI33 1791 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 E2F8A0AVK6 867 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 CHUKO15111 745 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 GADD45BO75293 160 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 GJB5O95377 273 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 LARGE1O95461 756 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 CFIP05156 583 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 RPL17P18621 184 aaKnown RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 TLX1P31314 330 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 ADKP55263 362 aaKnown RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 CCDC6Q16204 474 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 DPCR1Q3MIW9 517 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 FAXCQ5TGI0 409 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 CENPPQ6IPU0 288 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 DHX40Q8IX18 779 aaKnown RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 GRAMD1CQ8IYS0 662 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 HNRNPABQ99729 332 aaKnown RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 ULBP1Q9BZM6 244 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 TRIM31Q9BZY9 425 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 RABEP2Q9H5N1 569 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 SARS2Q9NP81 518 aaKnown RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 KRCC1Q9NPI7 259 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 OBP2AQ9NY56 170 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 ZFATQ9P243 1243 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 ARHGAP28Q9P2N2 729 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 MRTO4Q9UKD2 239 aaKnown RBP6.46□□□□□ -1.38
SMAD4-212ENST00000591126 CDC14AQ9UNH5 594 aa6.46□□□□□ -1.38
SMAD4-212ENST00000591126 PIK3R2O00459 728 aa6.45□□□□□ -1.38
SMAD4-212ENST00000591126 TXNDC9O14530 226 aa6.45□□□□□ -1.38
SMAD4-212ENST00000591126 ATG7O95352 703 aa6.45□□□□□ -1.38
SMAD4-212ENST00000591126 TRUB2O95900 331 aaKnown RBP6.45□□□□□ -1.38
SMAD4-212ENST00000591126 GLULP15104 373 aa6.45□□□□□ -1.38
SMAD4-212ENST00000591126 IDSP22304 550 aa6.45□□□□□ -1.38
SMAD4-212ENST00000591126 HSD17B2P37059 387 aa6.45□□□□□ -1.38
SMAD4-212ENST00000591126 NSUN2Q08J23 767 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMAD4-212ENST00000591126 ORC1Q13415 861 aa6.45□□□□□ -1.38
SMAD4-212ENST00000591126 ELOAQ14241 798 aaKnown RBP6.45□□□□□ -1.38
SMAD4-212ENST00000591126 CEP70Q8NHQ1 597 aa6.45□□□□□ -1.38
SMAD4-212ENST00000591126 FAM76AQ8TAV0 307 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms