RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 SIN3BO75182 1162 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 GRAP2O75791 330 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 GABBR2O75899 941 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 SNUPNO95149 360 aaKnown RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 PRKCGP05129 697 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 GJB1P08034 283 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 KITP10721 976 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 ACAT1P24752 427 aaKnown RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 IRX4P78413 519 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 UBAP2LQ14157 1087 aaKnown RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 RBBP5Q15291 538 aaKnown RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 CCDC153Q494R4 210 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 PPP1R26Q5T8A7 1209 aaPredicted RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 FOXB2Q5VYV0 432 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 NCBP2-AS2Q69YL0 99 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 TFB1MQ8WVM0 346 aaKnown RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 TRAPPC12Q8WVT3 735 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 HTR3CQ8WXA8 447 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 CLPTM1LQ96KA5 538 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 SORT1Q99523 831 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 PLEKHA5Q9HAU0 1116 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 ERAP1Q9NZ08 941 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 AP4E1Q9UPM8 1137 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 COL1A2P08123 1366 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 TPP1O14773 563 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 CASQ2O14958 399 aaPredicted RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 ITM2AO43736 263 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 PEX1O43933 1283 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 STK10O94804 968 aaKnown RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 ARF4P18085 180 aaPredicted RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 MX2P20592 715 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 GARSP41250 739 aaKnown RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 GRM5P41594 1212 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 GLUD2P49448 558 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 NUMBP49757 651 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 RGS7P49802 495 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 IDH3AP50213 366 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 PPP6R3Q5H9R7 873 aaPredicted RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 SPANXN3Q5MJ09 141 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 TREML2Q5T2D2 321 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 THEMIS2Q5TEJ8 643 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 RNF220Q5VTB9 566 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 METTL21CQ5VZV1 264 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 PDSS2Q86YH6 399 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 LRRC52Q8N7C0 313 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 PHC3Q8NDX5 983 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 PIP4K2CQ8TBX8 421 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 ARNTL2Q8WYA1 636 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 GBP5Q96PP8 586 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 KCTD15Q96SI1 283 aaPredicted RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 DHX35Q9H5Z1 703 aaKnown RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 COPG2Q9UBF2 871 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 SLC4A7Q9Y6M7 1214 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 BRCA1P38398 1863 aaKnown RBP12.73□□□□□ -0.37
PDE4A-207ENST00000590407 RALGAPA2Q2PPJ7 1873 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 WDR27A2RRH5 827 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 ANKRD33BA6NCL7 494 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 H2AFYO75367 372 aaKnown RBP12.73□□□□□ -0.37
PDE4A-207ENST00000590407 UPP2O95045 317 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 ITGA2BP08514 1039 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 VAV1P15498 845 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 GP5P40197 560 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 ACADSBP45954 432 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 HK2P52789 917 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 ABCE1P61221 599 aaKnown RBP12.73□□□□□ -0.37
PDE4A-207ENST00000590407 RPL10AP62906 217 aaKnown RBP12.73□□□□□ -0.37
PDE4A-207ENST00000590407 PDE1BQ01064 536 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 MDH1BQ5I0G3 518 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 GRTP1Q5TC63 336 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 ZCCHC23Q6ZST2 131 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 MAVSQ7Z434 540 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 C12orf29Q8N999 325 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 BTBD9Q96Q07 612 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 TTC1Q99614 292 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 CPNE1Q99829 537 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 FERMT1Q9BQL6 677 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 APOL6Q9BWW8 343 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 IGSF9Q9P2J2 1179 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 PCDHB12Q9Y5F1 795 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 CDY2AQ9Y6F7 541 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 CDY1Q9Y6F8 540 aa12.73□□□□□ -0.37
PDE4A-207ENST00000590407 PAPPA2Q9BXP8 1791 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 A0A087WZ62 844 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 UNCXA6NJT0 531 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 TMEM114B3SHH9 223 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 CNMDO75829 334 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 GRIA1P42261 906 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 BCAT1P54687 386 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 SH3BGRP55822 239 aaPredicted RBP12.72□□□□□ -0.37
PDE4A-207ENST00000590407 ASPHQ12797 758 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 CCNIQ14094 377 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 GRM2Q14416 872 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 DCAF4L1Q3SXM0 396 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 FSCBQ5H9T9 825 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 MAP3K21Q5TCX8 1036 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 SCUBE3Q8IX30 993 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 TMEM130Q8N3G9 435 aa12.72□□□□□ -0.37
PDE4A-207ENST00000590407 NME8Q8N427 588 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms