RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 PIK3R6Q5UE93 754 aa18.76■□□□□ 0.59
H3F3B-209ENST00000589949 DENND1BQ6P3S1 775 aa18.76■□□□□ 0.59
H3F3B-209ENST00000589949 MINDY1Q8N5J2 469 aa18.76■□□□□ 0.59
H3F3B-209ENST00000589949 UCMAQ8WVF2 138 aa18.76■□□□□ 0.59
H3F3B-209ENST00000589949 IRGQQ8WZA9 623 aa18.76■□□□□ 0.59
H3F3B-209ENST00000589949 LMLNQ96KR4 655 aa18.76■□□□□ 0.59
H3F3B-209ENST00000589949 SRRTQ9BXP5 876 aaKnown RBP18.76■□□□□ 0.59
H3F3B-209ENST00000589949 INTS2Q9H0H0 1204 aaKnown RBP18.76■□□□□ 0.59
H3F3B-209ENST00000589949 ACP6Q9NPH0 428 aa18.76■□□□□ 0.59
H3F3B-209ENST00000589949 SLCO1B1Q9Y6L6 691 aa18.76■□□□□ 0.59
H3F3B-209ENST00000589949 PCNX2A6NKB5 2137 aa18.76■□□□□ 0.59
H3F3B-209ENST00000589949 SPAARA0A1B0GVQ0 90 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 C1QTNF9BB2RNN3 333 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 ARHGAP33O14559 1287 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 SYNCRIPO60506 623 aaKnown RBP18.75■□□□□ 0.59
H3F3B-209ENST00000589949 GJB3O75712 270 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 LATS1O95835 1130 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 IGLV3-19P01714 112 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 C1QTNF9P0C862 333 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 CD59P13987 128 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 CD70P32970 193 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 PPP1R2P41236 205 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 GPD2P43304 727 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 RPL34P49207 117 aaKnown RBP18.75■□□□□ 0.59
H3F3B-209ENST00000589949 APBA1Q02410 837 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 CAMK2GQ13555 558 aaPredicted RBP18.75■□□□□ 0.59
H3F3B-209ENST00000589949 SERPINA13PQ6UXR4 307 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 CHST9Q7L1S5 443 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 SCUBE3Q8IX30 993 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.75■□□□□ 0.593e-17■■□□□ 13.1
H3F3B-209ENST00000589949 DNASE2BQ8WZ79 361 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 SIPA1Q96FS4 1042 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 FCRL2Q96LA5 508 aaPredicted RBP18.75■□□□□ 0.59
H3F3B-209ENST00000589949 HSFY1Q96LI6 401 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 PRICKLE1Q96MT3 831 aaPredicted RBP18.75■□□□□ 0.59
H3F3B-209ENST00000589949 TMEM121BQ9BXQ6 578 aaPredicted RBP18.75■□□□□ 0.59
H3F3B-209ENST00000589949 CYTH4Q9UIA0 394 aa18.75■□□□□ 0.59
H3F3B-209ENST00000589949 BICDL2A1A5D9 508 aa18.74■□□□□ 0.59
H3F3B-209ENST00000589949 UPK3BL1B0FP48 263 aa18.74■□□□□ 0.59
H3F3B-209ENST00000589949 UPK3BL2E5RIL1 263 aa18.74■□□□□ 0.59
H3F3B-209ENST00000589949 TIMM44O43615 452 aa18.74■□□□□ 0.59
H3F3B-209ENST00000589949 PAK1Q13153 545 aa18.74■□□□□ 0.59
H3F3B-209ENST00000589949 SYPL2Q5VXT5 272 aa18.74■□□□□ 0.59
H3F3B-209ENST00000589949 GJB7Q6PEY0 223 aa18.74■□□□□ 0.59
H3F3B-209ENST00000589949 RGL4Q8IZJ4 473 aa18.74■□□□□ 0.59
H3F3B-209ENST00000589949 DQX1Q8TE96 717 aaKnown RBP18.74■□□□□ 0.59
H3F3B-209ENST00000589949 PRCCQ92733 491 aaPredicted RBP18.74■□□□□ 0.59
H3F3B-209ENST00000589949 MTG2Q9H4K7 406 aa18.74■□□□□ 0.59
H3F3B-209ENST00000589949 GGA2Q9UJY4 613 aa18.74■□□□□ 0.59
H3F3B-209ENST00000589949 NAALADL1Q9UQQ1 740 aa18.74■□□□□ 0.59
H3F3B-209ENST00000589949 ZZEF1O43149 2961 aa18.74■□□□□ 0.59
H3F3B-209ENST00000589949 ZFHX4Q86UP3 3567 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 ACSL4O60488 711 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 TBL1XO60907 577 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 AFPP02771 609 aaKnown RBP18.73■□□□□ 0.59
H3F3B-209ENST00000589949 C7P10643 843 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 PABPC1P11940 636 aaKnown RBP18.73■□□□□ 0.59
H3F3B-209ENST00000589949 TBX4P57082 545 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 BNC1Q01954 994 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 PLEKHG6Q3KR16 790 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 MBLAC2Q68D91 279 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 FAM124AQ86V42 546 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 OR2T3Q8NH03 318 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 C1orf216Q8TAB5 229 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 ADAM32Q8TC27 787 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 FOXJ1Q92949 421 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 CAMK1GQ96NX5 476 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 DNAAF2Q9NVR5 837 aaKnown RBP18.73■□□□□ 0.59
H3F3B-209ENST00000589949 TJP2Q9UDY2 1190 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 XPO7Q9UIA9 1087 aaKnown RBP18.73■□□□□ 0.59
H3F3B-209ENST00000589949 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.73■□□□□ 0.59
H3F3B-209ENST00000589949 SPEGQ15772 3267 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 NUMA1Q14980 2115 aa18.73■□□□□ 0.59
H3F3B-209ENST00000589949 METTL12A8MUP2 240 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 ATXN3P54252 364 aaPredicted RBP18.72■□□□□ 0.59
H3F3B-209ENST00000589949 ZNF445P59923 1031 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 RPS24P62847 133 aaKnown RBP18.72■□□□□ 0.59
H3F3B-209ENST00000589949 PITX1P78337 314 aaPredicted RBP18.72■□□□□ 0.59
H3F3B-209ENST00000589949 RING1Q06587 406 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 CETN1Q12798 172 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 GRIK2Q13002 908 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 STILQ15468 1287 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 FNDC3BQ53EP0 1204 aaKnown RBP18.72■□□□□ 0.59
H3F3B-209ENST00000589949 SYCP2LQ5T4T6 812 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 RABEPKQ7Z6M1 372 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 ZCCHC9Q8N567 271 aaKnown RBP18.72■□□□□ 0.59
H3F3B-209ENST00000589949 CADM4Q8NFZ8 388 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 WFIKKN2Q8TEU8 576 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 MYO19Q96H55 970 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 SLC39A13Q96H72 371 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 CRACR2AQ9BSW2 395 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 SCNM1Q9BWG6 230 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 NUCKS1Q9H1E3 243 aaKnown RBP18.72■□□□□ 0.59
H3F3B-209ENST00000589949 UBE2TQ9NPD8 197 aaPredicted RBP18.72■□□□□ 0.59
H3F3B-209ENST00000589949 PRSS16Q9NQE7 514 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 STIM2Q9P246 746 aa18.72■□□□□ 0.59
H3F3B-209ENST00000589949 INTS6Q9UL03 887 aaKnown RBP18.72■□□□□ 0.59
H3F3B-209ENST00000589949 BECN2A8MW95 431 aa18.71■□□□□ 0.59
H3F3B-209ENST00000589949 MEI4A8MW99 385 aa18.71■□□□□ 0.59
H3F3B-209ENST00000589949 PAPSS1O43252 624 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms