RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 ABCA12Q86UK0 2595 aa8.43□□□□□ -1.06
SMAD4-209ENST00000589941 HRKO00198 91 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 ETV2O00321 342 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-209ENST00000589941 B4GALT5O43286 388 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 OPHN1O60890 802 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 MAFO75444 373 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-209ENST00000589941 GJB3O75712 270 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 CYBBP04839 570 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 SRGAP2CP0DJJ0 459 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 HNRNPLP14866 589 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMAD4-209ENST00000589941 FPR2P25090 351 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 RDXP35241 583 aaKnown RBP8.42□□□□□ -1.06
SMAD4-209ENST00000589941 EPHA5P54756 1037 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 HMGN5P82970 282 aaKnown RBP8.42□□□□□ -1.06
SMAD4-209ENST00000589941 TUSC3Q13454 348 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 IMMTQ16891 758 aaKnown RBP8.42□□□□□ -1.06
SMAD4-209ENST00000589941 PLEKHN1Q494U1 663 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-209ENST00000589941 FAM209AQ5JX71 171 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 TRIM68Q6AZZ1 485 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 ANO7Q6IWH7 933 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 PAQR3Q6TCH7 311 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 NAXDQ8IW45 347 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 HDDC3Q8N4P3 179 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 LSM14AQ8ND56 463 aaKnown RBP8.42□□□□□ -1.06
SMAD4-209ENST00000589941 MDGA1Q8NFP4 955 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 MYRIPQ8NFW9 859 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 KCNN1Q92952 543 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 ZSCAN31Q96LW9 406 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-209ENST00000589941 SLC38A3Q99624 504 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 UNC45AQ9H3U1 944 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 UBN1Q9NPG3 1134 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 RIC8AQ9NPQ8 531 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 NRBP2Q9NSY0 501 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 TCEAL9Q9UHQ7 104 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 LIMCH1Q9UPQ0 1083 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 GIT1Q9Y2X7 761 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 ATP6V1DQ9Y5K8 247 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMAD4-209ENST00000589941 CITO14578 2027 aa8.42□□□□□ -1.06
SMAD4-209ENST00000589941 ANAPC1Q9H1A4 1944 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 UQCRHLA0A096LP55 91 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 TEX51A0A1B0GUA7 166 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-209ENST00000589941 ZNF197O14709 1029 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 ATG13O75143 517 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 ABLIM3O94929 683 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 NPTXRO95502 500 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 NTRK1P04629 796 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 UQCRHP07919 91 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 EIF2S3P41091 472 aaKnown RBP8.41□□□□□ -1.06
SMAD4-209ENST00000589941 BRCC3P46736 316 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 ARPP19P56211 112 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 RPL11P62913 178 aaKnown RBP8.41□□□□□ -1.06
SMAD4-209ENST00000589941 SPIRE1Q08AE8 756 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 TWF1Q12792 350 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 NR1I3Q14994 352 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 MAPK6Q16659 721 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 ITPRIPL2Q3MIP1 535 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 PDXDC1Q6P996 788 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 RUFY3Q7L099 469 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 SYT13Q7L8C5 426 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 TMC6Q7Z403 805 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 CATIPQ7Z7H3 387 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 SYT12Q8IV01 421 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 ARID3BQ8IVW6 561 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-209ENST00000589941 LILRB2Q8N423 598 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 USP33Q8TEY7 942 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 TMEM143Q96AN5 459 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 EXOC2Q96KP1 924 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 KRTAP4-12Q9BQ66 201 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 CSRNP2Q9H175 543 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 CNTD2Q9H8S5 307 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 CYP4F11Q9HBI6 524 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 ASAH2Q9NR71 780 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 USP25Q9UHP3 1055 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 PILRBQ9UKJ0 227 aa8.41□□□□□ -1.06
SMAD4-209ENST00000589941 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-209ENST00000589941 LRBAP50851 2863 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 C22orf46C9J442 243 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 TRDMT1O14717 391 aaKnown RBP8.4□□□□□ -1.06
SMAD4-209ENST00000589941 STX6O43752 255 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 SLC28A2O43868 658 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 CBFA2T3O75081 653 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 VNN2O95498 520 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 TPM3P06753 285 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 ARSAP15289 507 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 ARF4P18085 180 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-209ENST00000589941 MAPKAPK2P49137 400 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 ADCY7P51828 1080 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 NAPAP54920 295 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 NPEPPSP55786 919 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 CLDN6P56747 220 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 LAMTOR4Q0VGL1 99 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 GRSF1Q12849 480 aaKnown RBP eCLIP8.4□□□□□ -1.06
SMAD4-209ENST00000589941 LY6DQ14210 128 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 ARHGAP29Q52LW3 1261 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 CYP4A22Q5TCH4 519 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 JAKMIP3Q5VZ66 844 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 NOTUMQ6P988 496 aa8.4□□□□□ -1.06
SMAD4-209ENST00000589941 CWC27Q6UX04 472 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms