RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 ZNF12P17014 697 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 MSH3P20585 1137 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 FOXR2Q6PJQ5 311 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 BTBD9Q96Q07 612 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 CGRRF1Q99675 332 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 NUAK2Q9H093 628 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 ZNF408Q9H9D4 720 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 ARHGEF3Q9NR81 526 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 MBD2Q9UBB5 411 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 AP3M1Q9Y2T2 418 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 TECPR2O15040 1411 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 TMEM114B3SHH9 223 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 FGFR3P22607 806 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 GRIK1P39086 918 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 PRIM2P49643 509 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 DPYSL3Q14195 570 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 SGO1Q5FBB7 561 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 PTRHD1Q6GMV3 140 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 XRRA1Q6P2D8 792 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 TTC30AQ86WT1 665 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 COLGALT1Q8NBJ5 622 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 TLCD1Q96CP7 247 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 PABPC5Q96DU9 382 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 TCF12Q99081 682 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 DENND2DQ9H6A0 471 aaPredicted RBP14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 SYTL2Q9HCH5 934 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 TRIM39Q9HCM9 518 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 TRMT6Q9UJA5 497 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 SLC12A4Q9UP95 1085 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 IFNA14P01570 189 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 CHKAP35790 457 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 PRKCEQ02156 737 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 TNK2Q07912 1038 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 FBXO33Q7Z6M2 555 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 ASB2Q96Q27 587 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 TBCBQ99426 244 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 NMRAL1Q9HBL8 299 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 TJP2Q9UDY2 1190 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 VANGL2Q9ULK5 521 aa14.96□□□□□ -0.01
SMARCA4-214ENST00000589677 SETD1BQ9UPS6 1966 aaKnown RBP14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 CYP1A2P05177 515 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 VCLP18206 1134 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 CHRM3P20309 590 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 LRPAP1P30533 357 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 COX10Q12887 443 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 CSHL1Q14406 222 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 TTLL4Q14679 1199 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 ANKS3Q6ZW76 656 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 TMC7Q7Z402 723 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 ACMSDQ8TDX5 336 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 DCUN1D1Q96GG9 259 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 ROGDIQ9GZN7 287 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 HDHD2Q9H0R4 259 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 DAGLAQ9Y4D2 1042 aa14.96□□□□□ -0.02
SMARCA4-214ENST00000589677 SYNDIG1LA6NDD5 238 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 CHADO15335 359 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 TNFRSF21O75509 655 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 MAGEA10P43363 369 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 CASP5P51878 434 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 PSME3P61289 254 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 ATF7IP2Q5U623 682 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 MZT2BQ6NZ67 158 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 ZNF34Q8IZ26 560 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 PDPRQ8NCN5 879 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 ITFG1Q8TB96 612 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 MAGEE2Q8TD90 523 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 FAM172AQ8WUF8 416 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 FIG4Q92562 907 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 QKIQ96PU8 341 aaKnown RBP eCLIP14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 MTG1Q9BT17 334 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 C8orf4Q9NR00 106 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 CCDC167Q9P0B6 97 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 EFCAB10A6NFE3 127 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 KLRC4O43908 158 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 SREBF1P36956 1147 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 TUBA4AP68366 448 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 SPIRE1Q08AE8 756 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 NKX1-1Q15270 411 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 EGFLAMQ63HQ2 1017 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 ACSS3Q9H6R3 686 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 EBF2Q9HAK2 575 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 ABCB10Q9NRK6 738 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 KCNH7Q9NS40 1196 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 BLOC1S4Q9NUP1 217 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 PREX1Q8TCU6 1659 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 APOC4-APOC2K7ER74 178 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 PSMD12O00232 456 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 CD4P01730 458 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 APOC2P02655 101 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 IL12AP29459 219 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 FLT3P36888 993 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 KIAA1841Q6NSI8 718 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 AFG1LQ8WV93 481 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 HPDLQ96IR7 371 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 WDR37Q9Y2I8 494 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 WDR27A2RRH5 827 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 AADACL2Q6P093 401 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 SV2AQ7L0J3 742 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 MASTLQ96GX5 879 aa14.95□□□□□ -0.02
SMARCA4-214ENST00000589677 POP1Q99575 1024 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms