RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 DRICH1Q6PGQ1 229 aaPredicted RBP10.54□□□□□ -0.72
APOC1-201ENST00000586638 GSTA5Q7RTV2 222 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 HDXQ7Z353 690 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 RBM23Q86U06 439 aaKnown RBP10.54□□□□□ -0.72
APOC1-201ENST00000586638 VSIG1Q86XK7 387 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 VPS52Q8N1B4 723 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 ALLCQ8N6M5 410 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 EFHBQ8N7U6 833 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 KLHL23Q8NBE8 558 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 GLIS1Q8NBF1 620 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 TTC13Q8NBP0 860 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 ATL2Q8NHH9 583 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 SLC35B2Q8TB61 432 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 RNF139Q8WU17 664 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 C2orf15Q8WU43 125 aaKnown RBP10.54□□□□□ -0.72
APOC1-201ENST00000586638 POF1BQ8WVV4 589 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 CASP10Q92851 521 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 NKD2Q969F2 451 aaPredicted RBP10.54□□□□□ -0.72
APOC1-201ENST00000586638 NTAN1Q96AB6 310 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 PGAP3Q96FM1 320 aaPredicted RBP10.54□□□□□ -0.72
APOC1-201ENST00000586638 PRRX2Q99811 253 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 CLSTN3Q9BQT9 956 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 TMEM121Q9BTD3 319 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 TRIM62Q9BVG3 475 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 MAK16Q9BXY0 300 aaKnown RBP10.54□□□□□ -0.72
APOC1-201ENST00000586638 OXCT2Q9BYC2 517 aaPredicted RBP10.54□□□□□ -0.72
APOC1-201ENST00000586638 SMOC2Q9H3U7 446 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 FBXO44Q9H4M3 255 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 ABCC13Q9NSE7 274 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 BRWD1Q9NSI6 2320 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 ETNK2Q9NVF9 386 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 CLEC1BQ9P126 229 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 SFMBT1Q9UHJ3 866 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 HPCAL4Q9UM19 191 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 ZNF148Q9UQR1 794 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 NEU2Q9Y3R4 380 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 YIPF1Q9Y548 306 aa10.54□□□□□ -0.72
APOC1-201ENST00000586638 ANAPC1Q9H1A4 1944 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 ZNF487B1APH4 448 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 LOC730098B7Z3J9 87 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 FAM72CH0Y354 149 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 H7C0C1 242 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 SGK1O00141 431 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 EEF2KO00418 725 aaKnown RBP10.53□□□□□ -0.72
APOC1-201ENST00000586638 RTN3O95197 1032 aaPredicted RBP10.53□□□□□ -0.72
APOC1-201ENST00000586638 SEC24AO95486 1093 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 ZSCAN5DPP0CG00 497 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 TGM2P21980 687 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 AMPD1P23109 780 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 KLRC2P26717 231 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 YWHAQP27348 245 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 PPM1AP35813 382 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 ATP5OP48047 213 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 NRIP1P48552 1158 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 CXCR3P49682 368 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 PTPN5P54829 565 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 GDF10P55107 478 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 RPL10AP62906 217 aaKnown RBP10.53□□□□□ -0.72
APOC1-201ENST00000586638 ZXDAP98168 799 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 GBE1Q04446 702 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 SCAPQ12770 1279 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 NNTQ13423 1086 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 IER5LQ5T953 404 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 FAM72AQ5TYM5 149 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 NCBP2-AS2Q69YL0 99 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 FAM72DQ6L9T8 149 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 DENND5BQ6ZUT9 1274 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 SYDE1Q6ZW31 735 aaPredicted RBP10.53□□□□□ -0.72
APOC1-201ENST00000586638 BEND5Q7L4P6 421 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 MTERF4Q7Z6M4 381 aaKnown RBP10.53□□□□□ -0.72
APOC1-201ENST00000586638 ADGRD2Q7Z7M1 963 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 DDX53Q86TM3 631 aaKnown RBP10.53□□□□□ -0.72
APOC1-201ENST00000586638 FAM72BQ86X60 149 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 SUGP1Q8IWZ8 645 aaKnown RBP10.53□□□□□ -0.72
APOC1-201ENST00000586638 CCDC33Q8N5R6 958 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 PRSS33Q8NF86 280 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 MICAL1Q8TDZ2 1067 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 LRRN4Q8WUT4 740 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 RNF34Q969K3 372 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 SNF8Q96H20 258 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 SPATA17Q96L03 361 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 PHOX2BQ99453 314 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 FMO2Q99518 471 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 ZBP1Q9H171 429 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 TLE6Q9H808 572 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 ARHGEF4Q9NR80 690 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 ZDHHC18Q9NUE0 388 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 IL37Q9NZH6 218 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 CWC15Q9P013 229 aaKnown RBP10.53□□□□□ -0.72
APOC1-201ENST00000586638 FBXW11Q9UKB1 542 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 MAGED2Q9UNF1 606 aaPredicted RBP10.53□□□□□ -0.72
APOC1-201ENST00000586638 HEY1Q9Y5J3 304 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 SHROOM3Q8TF72 1996 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 USP34Q70CQ2 3546 aa10.53□□□□□ -0.72
APOC1-201ENST00000586638 ATG2AQ2TAZ0 1938 aa10.52□□□□□ -0.72
APOC1-201ENST00000586638 MAP2K7O14733 419 aa10.52□□□□□ -0.73
APOC1-201ENST00000586638 FGF18O76093 207 aa10.52□□□□□ -0.73
APOC1-201ENST00000586638 IFNB1P01574 187 aa10.52□□□□□ -0.73
APOC1-201ENST00000586638 ITGAVP06756 1048 aa10.52□□□□□ -0.73
APOC1-201ENST00000586638 RBP3P10745 1247 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms