RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 GPR152Q8TDT2 470 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 SEPT5Q99719 369 aaPredicted RBP21.16■□□□□ 0.98
ATG4D-204ENST00000586417 SH3GL2Q99962 352 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 EPB41L4BQ9H329 900 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 FAM204AQ9H8W3 233 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 ABCC13Q9NSE7 274 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 ATP8A1Q9Y2Q0 1164 aa21.16■□□□□ 0.98
ATG4D-204ENST00000586417 HAPLN1P10915 354 aaPredicted RBP21.15■□□□□ 0.98
ATG4D-204ENST00000586417 EFHC2Q5JST6 749 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 HIBCHQ6NVY1 386 aaPredicted RBP21.15■□□□□ 0.98
ATG4D-204ENST00000586417 BBOF1Q8ND07 529 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 RNF139Q8WU17 664 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 NMUR1Q9HB89 426 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 CYP4F11Q9HBI6 524 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.15■□□□□ 0.98
ATG4D-204ENST00000586417 IL37Q9NZH6 218 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 ANAPC5Q9UJX4 755 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 SCML2Q9UQR0 700 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 DNALI1O14645 258 aaPredicted RBP21.15■□□□□ 0.98
ATG4D-204ENST00000586417 IFNB1P01574 187 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 ZFXP17010 805 aaPredicted RBP21.15■□□□□ 0.98
ATG4D-204ENST00000586417 ARL4AP40617 200 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 USP46P62068 366 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 GPS1Q13098 491 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 SEMA3BQ13214 749 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 NCBP2-AS2Q69YL0 99 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 ZC3H18Q86VM9 953 aaKnown RBP21.15■□□□□ 0.98
ATG4D-204ENST00000586417 C2orf15Q8WU43 125 aaKnown RBP21.15■□□□□ 0.98
ATG4D-204ENST00000586417 ARHGEF4Q9NR80 690 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 ETNK2Q9NVF9 386 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 PLAAQ9Y263 795 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 HEY1Q9Y5J3 304 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 NFS1Q9Y697 457 aa21.15■□□□□ 0.98
ATG4D-204ENST00000586417 EYSQ5T1H1 3165 aa21.14■□□□□ 0.98
ATG4D-204ENST00000586417 MTCL1Q9Y4B5 1905 aaKnown RBP21.14■□□□□ 0.98
ATG4D-204ENST00000586417 ATF6P18850 670 aa21.14■□□□□ 0.97
ATG4D-204ENST00000586417 AMPD1P23109 780 aa21.14■□□□□ 0.97
ATG4D-204ENST00000586417 CHKAP35790 457 aa21.14■□□□□ 0.97
ATG4D-204ENST00000586417 CLCN4P51793 760 aa21.14■□□□□ 0.97
ATG4D-204ENST00000586417 GBE1Q04446 702 aa21.14■□□□□ 0.97
ATG4D-204ENST00000586417 PDE12Q6L8Q7 609 aaKnown RBP21.14■□□□□ 0.97
ATG4D-204ENST00000586417 UBLCP1Q8WVY7 318 aaPredicted RBP21.14■□□□□ 0.97
ATG4D-204ENST00000586417 RSAD2Q8WXG1 361 aa21.14■□□□□ 0.97
ATG4D-204ENST00000586417 LRCH3Q96II8 777 aa21.14■□□□□ 0.97
ATG4D-204ENST00000586417 LMAN2LQ9H0V9 348 aa21.14■□□□□ 0.97
ATG4D-204ENST00000586417 GREB1Q4ZG55 1949 aa21.14■□□□□ 0.97
ATG4D-204ENST00000586417 ZNF638Q14966 1978 aaKnown RBP21.14■□□□□ 0.97
ATG4D-204ENST00000586417 A0A1W2PQH9 124 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 FAM92AA1XBS5 289 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 CLASP2O75122 1294 aaKnown RBP21.13■□□□□ 0.97
ATG4D-204ENST00000586417 PMS2P54278 862 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 SLC10A2Q12908 348 aaPredicted RBP21.13■□□□□ 0.97
ATG4D-204ENST00000586417 HSP90B2PQ58FF3 399 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 BTBD8Q5XKL5 378 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 DARS2Q6PI48 645 aaKnown RBP21.13■□□□□ 0.97
ATG4D-204ENST00000586417 LRIG3Q6UXM1 1119 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 B4GALNT4Q76KP1 1039 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 FAM71DQ8N9W8 422 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 FBXO44Q9H4M3 255 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 PRDM12Q9H4Q4 367 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 USP29Q9HBJ7 922 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 OSER1Q9NX31 292 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 MFHAS1Q9Y4C4 1052 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 PRRC2BQ5JSZ5 2229 aaKnown RBP21.13■□□□□ 0.97
ATG4D-204ENST00000586417 FAM72CH0Y354 149 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 H3BRJ5 948 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 IRAK2O43187 625 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 RARGP13631 454 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 STIP1P31948 543 aaKnown RBP21.13■□□□□ 0.97
ATG4D-204ENST00000586417 RPL22P35268 128 aaKnown RBP21.13■□□□□ 0.97
ATG4D-204ENST00000586417 DPYSQ14117 519 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 GRIN2CQ14957 1233 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 SLMAPQ14BN4 828 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 FAM72AQ5TYM5 149 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 FAM72DQ6L9T8 149 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 FAM72BQ86X60 149 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 TCEAL8Q8IYN2 117 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 GIPC2Q8TF65 315 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 MRPL38Q96DV4 380 aaKnown RBP21.13■□□□□ 0.97
ATG4D-204ENST00000586417 SMOC2Q9H3U7 446 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 PRDM16Q9HAZ2 1276 aa21.13■□□□□ 0.97
ATG4D-204ENST00000586417 BCLAF3A2AJT9 711 aaKnown RBP21.12■□□□□ 0.97
ATG4D-204ENST00000586417 H7C0C1 242 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 PRRG1O14668 218 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 MAP3K6O95382 1288 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 GLUD1P00367 558 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 ATP5OP48047 213 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 NR2C2P49116 596 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 RNASEH2BQ5TBB1 312 aaKnown RBP21.12■□□□□ 0.97
ATG4D-204ENST00000586417 MON1AQ86VX9 555 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 CASP10Q92851 521 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 RTP4Q96DX8 246 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 SPATA17Q96L03 361 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 PABPC3Q9H361 631 aaKnown RBP21.12■□□□□ 0.97
ATG4D-204ENST00000586417 SEMA4AQ9H3S1 761 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 WDCPQ9H6R7 721 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 DTLQ9NZJ0 730 aa21.12■□□□□ 0.97
ATG4D-204ENST00000586417 TPX2Q9ULW0 747 aaKnown RBP21.12■□□□□ 0.97
ATG4D-204ENST00000586417 CREB3O43889 395 aa21.11■□□□□ 0.97
ATG4D-204ENST00000586417 EPCAMP16422 314 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms