RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 MIPP30301 263 aa17.34■□□□□ 0.37
GCDH-203ENST00000585420 CTNNA1P35221 906 aaKnown RBP17.34■□□□□ 0.37
GCDH-203ENST00000585420 RDXP35241 583 aaKnown RBP17.34■□□□□ 0.37
GCDH-203ENST00000585420 PCK1P35558 622 aa17.34■□□□□ 0.37
GCDH-203ENST00000585420 HDAC4P56524 1084 aa17.34■□□□□ 0.37
GCDH-203ENST00000585420 DEUP1Q05D60 604 aa17.34■□□□□ 0.37
GCDH-203ENST00000585420 MLF2Q15773 248 aaPredicted RBP17.34■□□□□ 0.37
GCDH-203ENST00000585420 HADHQ16836 314 aaKnown RBP17.34■□□□□ 0.37
GCDH-203ENST00000585420 STRADAQ7RTN6 431 aa17.34■□□□□ 0.37
GCDH-203ENST00000585420 BMP8AQ7Z5Y6 402 aa17.34■□□□□ 0.37
GCDH-203ENST00000585420 DQX1Q8TE96 717 aaKnown RBP17.34■□□□□ 0.37
GCDH-203ENST00000585420 CENPIQ92674 756 aaPredicted RBP17.34■□□□□ 0.37
GCDH-203ENST00000585420 KRT35Q92764 455 aa17.34■□□□□ 0.37
GCDH-203ENST00000585420 NT5C3BQ969T7 300 aa17.34■□□□□ 0.37
GCDH-203ENST00000585420 KLF16Q9BXK1 252 aaPredicted RBP17.34■□□□□ 0.37
GCDH-203ENST00000585420 HPS4Q9NQG7 708 aa17.34■□□□□ 0.37
GCDH-203ENST00000585420 DDIT4Q9NX09 232 aa17.34■□□□□ 0.37
GCDH-203ENST00000585420 DUS2Q9NX74 493 aaKnown RBP17.34■□□□□ 0.37
GCDH-203ENST00000585420 CALCOCO1Q9P1Z2 691 aa17.34■□□□□ 0.37
GCDH-203ENST00000585420 PCSK1NQ9UHG2 260 aa17.34■□□□□ 0.37
GCDH-203ENST00000585420 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.34■□□□□ 0.37
GCDH-203ENST00000585420 SHISA7A6NL88 538 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 KCNK3O14649 394 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 PSTPIP1O43586 416 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 PRPSAP2O60256 369 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 TRUB2O95900 331 aaKnown RBP17.33■□□□□ 0.37
GCDH-203ENST00000585420 IRF1P10914 325 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 ARSAP15289 507 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 CTNNA2P26232 953 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 SOX9P48436 509 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 MARCKSL1P49006 195 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 ATXN1P54253 815 aaKnown RBP17.33■□□□□ 0.37
GCDH-203ENST00000585420 EFEMP1Q12805 493 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 ZFYVE27Q5T4F4 411 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 OTUD1Q5VV17 481 aaPredicted RBP17.33■□□□□ 0.37
GCDH-203ENST00000585420 TAC4Q86UU9 113 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 MIB1Q86YT6 1006 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 FLCNQ8NFG4 579 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 CSGALNACT1Q8TDX6 532 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 UBE2Q2Q8WVN8 375 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 NCAPGQ9BPX3 1015 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 MFSD1Q9H3U5 465 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 ZWILCHQ9H900 591 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 USP18Q9UMW8 372 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 SNX12Q9UMY4 172 aa17.33■□□□□ 0.37
GCDH-203ENST00000585420 HELZP42694 1942 aaKnown RBP17.33■□□□□ 0.36
GCDH-203ENST00000585420 TICRRQ7Z2Z1 1910 aa17.33■□□□□ 0.36
GCDH-203ENST00000585420 DDX3YO15523 660 aaKnown RBP17.33■□□□□ 0.36
GCDH-203ENST00000585420 URI1O94763 535 aaPredicted RBP17.33■□□□□ 0.36
GCDH-203ENST00000585420 CXCR5P32302 372 aa17.33■□□□□ 0.36
GCDH-203ENST00000585420 STARD6P59095 220 aa17.33■□□□□ 0.36
GCDH-203ENST00000585420 SLC25A11Q02978 314 aaKnown RBP17.33■□□□□ 0.36
GCDH-203ENST00000585420 RUNX3Q13761 415 aa17.33■□□□□ 0.36
GCDH-203ENST00000585420 EML3Q32P44 896 aa17.33■□□□□ 0.36
GCDH-203ENST00000585420 PAPD7Q5XG87 772 aaKnown RBP17.33■□□□□ 0.36
GCDH-203ENST00000585420 TPRG1Q6ZUI0 275 aa17.33■□□□□ 0.36
GCDH-203ENST00000585420 TADA2BQ86TJ2 420 aa17.33■□□□□ 0.36
GCDH-203ENST00000585420 DDX42Q86XP3 938 aaKnown RBP eCLIP17.33■□□□□ 0.36
GCDH-203ENST00000585420 CDK5RAP1Q96SZ6 601 aaKnown RBP17.33■□□□□ 0.36
GCDH-203ENST00000585420 OLA1Q9NTK5 396 aaKnown RBP17.33■□□□□ 0.36
GCDH-203ENST00000585420 SFMBT1Q9UHJ3 866 aa17.33■□□□□ 0.36
GCDH-203ENST00000585420 RASAL2Q9UJF2 1139 aa17.33■□□□□ 0.36
GCDH-203ENST00000585420 PCDHA3Q9Y5H8 950 aa17.33■□□□□ 0.36
GCDH-203ENST00000585420 SAR1BQ9Y6B6 198 aa17.33■□□□□ 0.36
GCDH-203ENST00000585420 PIAS3Q9Y6X2 628 aa17.33■□□□□ 0.36
GCDH-203ENST00000585420 USP34Q70CQ2 3546 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 COL4A2P08572 1712 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 STK25O00506 426 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 GREM1O60565 184 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 IL1R2P27930 398 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 GBP1P32455 592 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 PRKCQQ04759 706 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 SMTNL2Q2TAL5 461 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 LRRC38Q5VT99 294 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 CWF19L1Q69YN2 538 aaKnown RBP17.32■□□□□ 0.36
GCDH-203ENST00000585420 TXNRD3NBQ6F5E7 133 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 SND1Q7KZF4 910 aaKnown RBP eCLIP17.32■□□□□ 0.36
GCDH-203ENST00000585420 FAM131BQ86XD5 332 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 ALG3Q92685 438 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 OSBPL9Q96SU4 736 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 TBC1D17Q9HA65 648 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 PIGVQ9NUD9 493 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 SH3BP1Q9Y3L3 701 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 MYO15AQ9UKN7 3530 aa17.32■□□□□ 0.36
GCDH-203ENST00000585420 KIF26AQ9ULI4 1882 aaPredicted RBP17.31■□□□□ 0.36
GCDH-203ENST00000585420 E2F8A0AVK6 867 aa17.31■□□□□ 0.36
GCDH-203ENST00000585420 MSI1O43347 362 aaKnown RBP17.31■□□□□ 0.36
GCDH-203ENST00000585420 SRGAP2O75044 1071 aa17.31■□□□□ 0.36
GCDH-203ENST00000585420 ENDOD1O94919 500 aa17.31■□□□□ 0.36
GCDH-203ENST00000585420 F9P00740 461 aa17.31■□□□□ 0.36
GCDH-203ENST00000585420 KRT7P08729 469 aa17.31■□□□□ 0.36
GCDH-203ENST00000585420 TCP1P17987 556 aaKnown RBP17.31■□□□□ 0.36
GCDH-203ENST00000585420 IFNAR2P48551 515 aa17.31■□□□□ 0.36
GCDH-203ENST00000585420 KPNA1P52294 538 aaPredicted RBP17.31■□□□□ 0.36
GCDH-203ENST00000585420 RWDD2BP57060 319 aa17.31■□□□□ 0.36
GCDH-203ENST00000585420 PDGFRLQ15198 375 aa17.31■□□□□ 0.36
GCDH-203ENST00000585420 KCNT1Q5JUK3 1230 aa17.31■□□□□ 0.36
GCDH-203ENST00000585420 BNIPLQ7Z465 357 aa17.31■□□□□ 0.36
GCDH-203ENST00000585420 POLNQ7Z5Q5 900 aa17.31■□□□□ 0.36
GCDH-203ENST00000585420 ADGRG2Q8IZP9 1017 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms