RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 ARHGAP1Q07960 439 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 RABGAP1LQ5R372 815 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 C1orf146Q5VVC0 180 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ARHGAP17Q68EM7 881 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 CASC4Q6P4E1 433 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 LRRC8BQ6P9F7 803 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 CCDC185Q8N715 623 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 NLRP7Q8WX94 980 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 CDKL2Q92772 493 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ATP2A3Q93084 1043 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 CXCL16Q9H2A7 254 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 GPAMQ9HCL2 828 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 DDX43Q9NXZ2 648 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 SLC17A6Q9P2U8 582 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 DCDC2Q9UHG0 476 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 DNAJC16Q9Y2G8 782 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 NR2E3Q9Y5X4 410 aa14.62□□□□□ -0.07
CDK5RAP3-237ENST00000585163 HACD1B0YJ81 288 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 SCNN1AP37088 669 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 RPL10AP62906 217 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 CRADDP78560 199 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 SOWAHAQ2M3V2 549 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 UNC93AQ86WB7 457 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 CCNJLQ8IV13 435 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ZNF513Q8N8E2 541 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ARNTL2Q8WYA1 636 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 IFT43Q96FT9 208 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 XPNPEP3Q9NQH7 507 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 MFHAS1Q9Y4C4 1052 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 A0A088AWK7 358 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 C6orf222P0C671 652 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 GOT1P17174 413 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 RPL34P49207 117 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 NAB1Q13506 487 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 PCLAFQ15004 111 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 GSTA3Q16772 222 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 COLGALT1Q8NBJ5 622 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 CLMNQ96JQ2 1002 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ZMAT2Q96NC0 199 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 LGMNQ99538 433 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 LPIN3Q9BQK8 851 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 EIF2B3Q9NR50 452 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 PPP1R1BQ9UD71 204 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 APOBEC2Q9Y235 224 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 DERAQ9Y315 318 aa14.61□□□□□ -0.07
CDK5RAP3-237ENST00000585163 OTOFQ9HC10 1997 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 MAGEA13PA6NCF6 341 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 KLHL2O95198 593 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ZBTB7AO95365 584 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 SERPINE1P05121 402 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 FESP07332 822 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 CYP2C8P10632 490 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 PGAM1P18669 254 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 BST2Q10589 180 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 LAMC2Q13753 1193 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 TMCO4Q5TGY1 634 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 DEFB132Q7Z7B7 95 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ANKRD52Q8NB46 1076 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 OR6B3Q8NGW1 331 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 OTUD5Q96G74 571 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 DPEP3Q9H4B8 488 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 PLEKHA5Q9HAU0 1116 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 NDE1Q9NXR1 346 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ENO4A6NNW6 628 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 PRKCGP05129 697 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ITGA2BP08514 1039 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 GRK2P25098 689 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 INSCQ1MX18 579 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 GJC2Q5T442 439 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 MTHFD1LQ6UB35 978 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 STRADAQ7RTN6 431 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 PYROXD2Q8N2H3 581 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 C7orf31Q8N865 590 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 NAT9Q9BTE0 207 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 RCOR3Q9P2K3 495 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 PSAT1Q9Y617 370 aa14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 MYO18AQ92614 2054 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-237ENST00000585163 COL1A2P08123 1366 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 MEI4A8MW99 385 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 F5H423 210 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 MAP3K13O43283 966 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 OPHN1O60890 802 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 SIN3BO75182 1162 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 FKBP6O75344 327 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 MGAT1P26572 445 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ARL4AP40617 200 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 BCAT1P54687 386 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 SESN2P58004 480 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 DSG1Q02413 1049 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 HIC1Q14526 733 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ZBTB6Q15916 424 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 DPY19L2Q6NUT2 758 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ATG14Q6ZNE5 492 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 MAVSQ7Z434 540 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 LRRC52Q8N7C0 313 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ITFG2Q969R8 447 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 NR1H4Q96RI1 486 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 SORT1Q99523 831 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 FAM96AQ9H5X1 160 aa14.59□□□□□ -0.07
CDK5RAP3-237ENST00000585163 ELP3Q9H9T3 547 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms