RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 RPL36ALQ969Q0 106 aaKnown RBP4.42□□□□□ -1.7
SKA2-210ENST00000584089 MCRS1Q96EZ8 462 aa4.42□□□□□ -1.7
SKA2-210ENST00000584089 REXO5Q96IC2 774 aaKnown RBP4.42□□□□□ -1.7
SKA2-210ENST00000584089 FCRL5Q96RD9 977 aa4.42□□□□□ -1.7
SKA2-210ENST00000584089 SIGLEC11Q96RL6 698 aa4.42□□□□□ -1.7
SKA2-210ENST00000584089 RMDN3Q96TC7 470 aa4.42□□□□□ -1.7
SKA2-210ENST00000584089 C1QTNF7Q9BXJ2 289 aa4.42□□□□□ -1.7
SKA2-210ENST00000584089 SLC29A3Q9BZD2 475 aa4.42□□□□□ -1.7
SKA2-210ENST00000584089 TRIM2Q9C040 744 aa4.42□□□□□ -1.7
SKA2-210ENST00000584089 HERC5Q9UII4 1024 aaKnown RBP4.42□□□□□ -1.7
SKA2-210ENST00000584089 ZBTB1Q9Y2K1 713 aa4.42□□□□□ -1.7
SKA2-210ENST00000584089 INO80B-WBP1J3KQ70 363 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 LARGE1O95461 756 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 SGPL1O95470 568 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 RPS6KB1P23443 525 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 CDK7P50613 346 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 RPS13P62277 151 aaKnown RBP4.41□□□□□ -1.7
SKA2-210ENST00000584089 FOXO1Q12778 655 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 EARS2Q5JPH6 523 aaKnown RBP4.41□□□□□ -1.7
SKA2-210ENST00000584089 ZNF569Q5MCW4 686 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 ATPAF1Q5TC12 328 aaPredicted RBP4.41□□□□□ -1.7
SKA2-210ENST00000584089 ANKRD40Q6AI12 368 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 C1QL2Q7Z5L3 287 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 ATG16L2Q8NAA4 619 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 DENND1AQ8TEH3 1009 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 PIGOQ8TEQ8 1089 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 COQ8BQ96D53 544 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 TRMT61AQ96FX7 289 aaKnown RBP4.41□□□□□ -1.7
SKA2-210ENST00000584089 RTKNQ9BST9 563 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 CCDC134Q9H6E4 229 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 ERVK-5Q9HDB9 667 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 TUBA8Q9NY65 449 aaPredicted RBP4.41□□□□□ -1.7
SKA2-210ENST00000584089 DACT1Q9NYF0 836 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 CNTN6Q9UQ52 1028 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 B3GNT3Q9Y2A9 372 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 EMSYQ7Z589 1322 aa4.41□□□□□ -1.7
SKA2-210ENST00000584089 FAM90A18PA6NE21 464 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 FAM90A16PA6NEW6 464 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 C3orf70A6NLC5 250 aaPredicted RBP4.4□□□□□ -1.71
SKA2-210ENST00000584089 FAM90A9PA6NNJ1 464 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 EFCAB8A8MWE9 144 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 FAM90A5PA8MXJ8 464 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 KIF28PB7ZC32 967 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 M0QYT0 321 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 ACKR2O00590 384 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 ACTL6BO94805 426 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 CYP3A4P08684 503 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 FAM90A15PP0C7V4 464 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 FAM90A14PP0C7W9 464 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 IGFBP2P18065 325 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 HOXA7P31268 230 aaPredicted RBP4.4□□□□□ -1.71
SKA2-210ENST00000584089 MMP13P45452 471 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 ZNF81P51508 661 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 SLC12A2P55011 1212 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 RPL15P61313 204 aaKnown RBP4.4□□□□□ -1.71
SKA2-210ENST00000584089 RBM6P78332 1123 aaKnown RBP4.4□□□□□ -1.71
SKA2-210ENST00000584089 SF3A3Q12874 501 aaKnown RBP eCLIP4.4□□□□□ -1.71
SKA2-210ENST00000584089 MTA1Q13330 715 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 STIM1Q13586 685 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 SLC9C1Q4G0N8 1177 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 CCDC38Q502W7 563 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 PAPD7Q5XG87 772 aaKnown RBP4.4□□□□□ -1.71
SKA2-210ENST00000584089 C11orf87Q6NUJ2 197 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 SLC39A5Q6ZMH5 540 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 RINLQ6ZS11 566 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 CACNA2D3Q8IZS8 1091 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 ADPRHL1Q8NDY3 354 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 OR1N1Q8NGS0 311 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 SMG7Q92540 1137 aaKnown RBP4.4□□□□□ -1.71
SKA2-210ENST00000584089 GPR78Q96P69 363 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 TMEM79Q9BSE2 394 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 PRDM16Q9HAZ2 1276 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 MLXIPLQ9NP71 852 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 LRFN1Q9P244 771 aa4.4□□□□□ -1.71
SKA2-210ENST00000584089 C2CD4BA6NLJ0 364 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 SLC38A8A6NNN8 435 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 TRIM38O00635 465 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 PPP6R2O75170 966 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 TOP3BO95985 862 aaKnown RBP4.39□□□□□ -1.71
SKA2-210ENST00000584089 LDHAP00338 332 aaKnown RBP4.39□□□□□ -1.71
SKA2-210ENST00000584089 ALDOAP04075 364 aaKnown RBP4.39□□□□□ -1.71
SKA2-210ENST00000584089 RFPL3SP0C7P2 107 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 CTSAP10619 480 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 GYS1P13807 737 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 AKR1A1P14550 325 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 TFEBP19484 476 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 GRK5P34947 590 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 SOX2P48431 317 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 FOXL2P58012 376 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 AP2B1P63010 937 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 ID2Q02363 134 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 ZNF91Q05481 1191 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 KLF9Q13886 244 aaPredicted RBP4.39□□□□□ -1.71
SKA2-210ENST00000584089 ETFDHQ16134 617 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 BTBD16Q32M84 506 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 Q4G0T1 1027 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 C10orf25Q5T742 122 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 PXDC1Q5TGL8 231 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 ZNF425Q6IV72 752 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 NFRKBQ6P4R8 1299 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms