RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 CDX4O14627 284 aaPredicted RBP10.31□□□□□ -0.76
MKS1-212ENST00000583577 KHNYNO15037 678 aaKnown RBP10.31□□□□□ -0.76
MKS1-212ENST00000583577 TTI1O43156 1089 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 C1QL1O75973 258 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 TNNC2P02585 160 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 PSMC3P17980 439 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 TNNI1P19237 187 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 LRPAP1P30533 357 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 HOXA9P31269 272 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 RDXP35241 583 aaKnown RBP10.31□□□□□ -0.76
MKS1-212ENST00000583577 SLC1A1P43005 524 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 CASP4P49662 377 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 VAMP7P51809 220 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 KPNA1P52294 538 aaPredicted RBP10.31□□□□□ -0.76
MKS1-212ENST00000583577 PSMD6Q15008 389 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 TNFAIP8L3Q5GJ75 292 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 FAM78AQ5JUQ0 283 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 DGKKQ5KSL6 1271 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 RTP2Q5QGT7 225 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 VITQ6UXI7 678 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 CPLX4Q7Z7G2 160 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 ZNF677Q86XU0 584 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 JAMLQ86YT9 394 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 OLIG1Q8TAK6 271 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 CCHCR1Q8TD31 782 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 TMC2Q8TDI7 906 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 CSGALNACT1Q8TDX6 532 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 XPO6Q96QU8 1125 aaKnown RBP10.31□□□□□ -0.76
MKS1-212ENST00000583577 AP1M1Q9BXS5 423 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 GPR88Q9GZN0 384 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 DUSP15Q9H1R2 295 aaPredicted RBP10.31□□□□□ -0.76
MKS1-212ENST00000583577 PPCSQ9HAB8 311 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 WHRNQ9P202 907 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 GTF3C4Q9UKN8 822 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 NOVA2Q9UNW9 492 aaKnown RBP10.31□□□□□ -0.76
MKS1-212ENST00000583577 COQ4Q9Y3A0 265 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 ALG6Q9Y672 507 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 BCLAF3A2AJT9 711 aaKnown RBP10.3□□□□□ -0.76
MKS1-212ENST00000583577 SLC38A8A6NNN8 435 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 DCLK1O15075 740 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 TCEA3O75764 348 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 RASSF9O75901 435 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 RHOBTB1O94844 696 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 CYP1A2P05177 515 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 RHOP08100 348 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 DLATP10515 647 aaKnown RBP10.3□□□□□ -0.76
MKS1-212ENST00000583577 ITIH2P19823 946 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 PAX3P23760 479 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 BPIFB4P59827 614 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 PTP4A2Q12974 167 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 CALCOCO2Q13137 446 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 XRCC4Q13426 336 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 DUOXA2Q1HG44 320 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 FAM171A1Q5VUB5 890 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 LMBRD2Q68DH5 695 aaPredicted RBP10.3□□□□□ -0.76
MKS1-212ENST00000583577 CEP57Q86XR8 500 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 WDR49Q8IV35 697 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 CCDC197Q8NCU1 140 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 TTC8Q8TAM2 541 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 LMO3Q8TAP4 145 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 MDM1Q8TC05 714 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 SLC39A7Q92504 469 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 ART4Q93070 314 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 CCDC127Q96BQ5 260 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 CRELD1Q96HD1 420 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 SEC16BQ96JE7 1060 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 ZNF560Q96MR9 790 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 SERPINB12Q96P63 405 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 CGRRF1Q99675 332 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 CLSTN3Q9BQT9 956 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 TTPALQ9BTX7 342 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 LRRC19Q9H756 370 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 TRPV5Q9NQA5 729 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 SAMD15Q9P1V8 674 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 ITGA11Q9UKX5 1188 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.3□□□□□ -0.76
MKS1-212ENST00000583577 PCDHA3Q9Y5H8 950 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 ACTL7BQ9Y614 415 aa10.3□□□□□ -0.76
MKS1-212ENST00000583577 CEP192Q8TEP8 1941 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 ARHGEF37A1IGU5 675 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 FAM221BA6H8Z2 402 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 PATE3B3GLJ2 98 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 H0Y626 953 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 O00370 1275 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 RGS16O15492 202 aaPredicted RBP10.29□□□□□ -0.76
MKS1-212ENST00000583577 ADAM12O43184 909 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 TRIM16O95361 564 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 ITGB3P05106 788 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 KRT19P08727 400 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 HPDP32754 393 aaPredicted RBP10.29□□□□□ -0.76
MKS1-212ENST00000583577 PNPLA4P41247 253 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 VIPR2P41587 438 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 PTGIRP43119 386 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 BRCC3P46736 316 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 TAF6P49848 677 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 PDE6CP51160 858 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 MNAT1P51948 309 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 AP3M2P53677 418 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 WNT7BP56706 349 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 RWDD2BP57060 319 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms