RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	VPS41	P49754	854 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	AGTR2	P50052	363 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	CDK7	P50613	346 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	FAM3B	P58499	235 aa	Predicted RBP	4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	SLC14A1	Q13336	389 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	AWAT1	Q58HT5	328 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	LCE5A	Q5TCM9	118 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	RANBP10	Q6VN20	620 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	CHSY1	Q86X52	802 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	FTSJ3	Q8IY81	847 aa	Known RBP	4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	THAP4	Q8WY91	577 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	GCC1	Q96CN9	775 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	RITA1	Q96K30	269 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	ASB2	Q96Q27	587 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	RNF26	Q9BY78	433 aa	Predicted RBP	4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	PRDM13	Q9H4Q3	707 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	ASNSD1	Q9NWL6	643 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	SPATA31A1	Q5TZJ5	1347 aa		4.97	□□□□□ -1.61
NUP85-222	ENST00000583569	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	TMEM232	C9JQI7	657 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	ALDOA	P04075	364 aa	Known RBP	4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	NHLRC4	P0CG21	123 aa	Predicted RBP	4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	CYP2D6	P10635	497 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	ATF7	P17544	494 aa	Predicted RBP	4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	NDUFS1	P28331	727 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	RBM5	P52756	815 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	TAS2R50	P59544	299 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	TLE3	Q04726	772 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	PDCL	Q13371	301 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	GAB1	Q13480	694 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	PFKFB3	Q16875	520 aa	Predicted RBP	4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	PROSER3	Q2NL68	480 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	HSP90AB4P	Q58FF6	505 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	DGAT2L7P	Q6IED9	249 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	SYT13	Q7L8C5	426 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	RD3	Q7Z3Z2	195 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	C2CD5	Q86YS7	1000 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	FAM98A	Q8NCA5	519 aa	Known RBP	4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	SRFBP1	Q8NEF9	429 aa	Known RBP	4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	SPPL3	Q8TCT6	385 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	NELL1	Q92832	810 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	RILPL2	Q969X0	211 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	ZG16B	Q96DA0	208 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	TRMT61A	Q96FX7	289 aa	Known RBP	4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	R3HDML	Q9H3Y0	253 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	ARL8B	Q9NVJ2	186 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	SEMA5B	Q9P283	1151 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	MAFF	Q9ULX9	164 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	PCDHA10	Q9Y5I2	948 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	AOX1	Q06278	1338 aa		4.96	□□□□□ -1.62
NUP85-222	ENST00000583569	AGAP5	A6NIR3	686 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	C3orf70	A6NLC5	250 aa	Predicted RBP	4.95	□□□□□ -1.62
NUP85-222	ENST00000583569		B9A039	149 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	CYP3A4	P08684	503 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	RXRA	P19793	462 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	HOXD12	P35452	270 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	STAT6	P42226	847 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	PAPOLA	P51003	745 aa	Known RBP	4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	ACTR2	P61160	394 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	TUBA4A	P68366	448 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	KPNB1	Q14974	876 aa	Known RBP	4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	TAF12	Q16514	161 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	FBXO47	Q5MNV8	452 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	SYNE3	Q6ZMZ3	975 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	ADGRG3	Q86Y34	549 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	LAS2	Q8IYD9	372 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	ASB12	Q8WXK4	309 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	SDCCAG3	Q96C92	435 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	TRIM2	Q9C040	744 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	NUAK2	Q9H093	628 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	CHODL	Q9H9P2	273 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	PRDM16	Q9HAZ2	1276 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	G6PC2	Q9NQR9	355 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	TMLHE	Q9NVH6	421 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	FEM1B	Q9UK73	627 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	B3GNT3	Q9Y2A9	372 aa		4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.95	□□□□□ -1.62
NUP85-222	ENST00000583569	COL11A2	P13942	1736 aa	Predicted RBP	4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	CCDC189	A1A4V9	331 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	MANSC4	A6NHS7	340 aa	Predicted RBP	4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	TISP43	B9A030	160 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	PRRT4	C9JH25	899 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	EIF3F	O00303	357 aa	Predicted RBP	4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	PRY	O14603	147 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	RNF8	O76064	485 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	HEXIM1	O94992	359 aa	Known RBP	4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	TK1	P04183	234 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	CYP2A6	P11509	494 aa	Predicted RBP	4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	MAPK9	P45984	424 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	PCP4	P48539	62 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	RCAN1	P53805	252 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	FOXL2	P58012	376 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	SMAD1	Q15797	465 aa	Known RBP	4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	KRTAP15-1	Q3LI76	137 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	GLE1	Q53GS7	698 aa	Known RBP	4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	SLC39A5	Q6ZMH5	540 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	TMEM57	Q8N5G2	664 aa		4.94	□□□□□ -1.62
NUP85-222	ENST00000583569	CLEC4C	Q8WTT0	213 aa		4.94	□□□□□ -1.62

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